RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
CNIH4-204ENST00000366860 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
CNIH4-204ENST00000366860 KMT2DO14686 5537 aa6.09□□□□□ -1.44
CNIH4-204ENST00000366860 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
CNIH4-204ENST00000366860 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
CNIH4-204ENST00000366860 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
CNIH4-204ENST00000366860 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
CNIH4-204ENST00000366860 KRTAP5-9P26371 169 aa5.94□□□□□ -1.46
CNIH4-204ENST00000366860 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
CNIH4-204ENST00000366860 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
CNIH4-204ENST00000366860 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
CNIH4-204ENST00000366860 KRTAP19-7Q3SYF9 63 aa5.82□□□□□ -1.48
CNIH4-204ENST00000366860 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
CNIH4-204ENST00000366860 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
CNIH4-204ENST00000366860 MT1EP04732 61 aa5.76□□□□□ -1.49
CNIH4-204ENST00000366860 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
CNIH4-204ENST00000366860 NEBP20929 6669 aa5.74□□□□□ -1.49
CNIH4-204ENST00000366860 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
CNIH4-204ENST00000366860 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
CNIH4-204ENST00000366860 SPRR2EP22531 72 aa5.68□□□□□ -1.5
CNIH4-204ENST00000366860 MT3P25713 68 aa5.68□□□□□ -1.5
CNIH4-204ENST00000366860 SPRR2BP35325 72 aa5.68□□□□□ -1.5
CNIH4-204ENST00000366860 SPRR2AP35326 72 aa5.68□□□□□ -1.5
CNIH4-204ENST00000366860 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
CNIH4-204ENST00000366860 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
CNIH4-204ENST00000366860 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
CNIH4-204ENST00000366860 MT1LQ93083 61 aa5.59□□□□□ -1.51
CNIH4-204ENST00000366860 MT1GP13640 62 aa5.54□□□□□ -1.52
CNIH4-204ENST00000366860 SPRR2DP22532 72 aa5.49□□□□□ -1.53
CNIH4-204ENST00000366860 MT1MQ8N339 61 aa5.45□□□□□ -1.54
CNIH4-204ENST00000366860 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
CNIH4-204ENST00000366860 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
CNIH4-204ENST00000366860 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
CNIH4-204ENST00000366860 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
CNIH4-204ENST00000366860 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
CNIH4-204ENST00000366860 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
CNIH4-204ENST00000366860 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
CNIH4-204ENST00000366860 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
CNIH4-204ENST00000366860 LCE1FQ5T754 118 aa5.14□□□□□ -1.59
CNIH4-204ENST00000366860 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
CNIH4-204ENST00000366860 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
CNIH4-204ENST00000366860 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
CNIH4-204ENST00000366860 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
CNIH4-204ENST00000366860 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
CNIH4-204ENST00000366860 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
CNIH4-204ENST00000366860 MT1AP04731 61 aa4.79□□□□□ -1.64
CNIH4-204ENST00000366860 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
CNIH4-204ENST00000366860 MT4P47944 62 aa4.72□□□□□ -1.65
CNIH4-204ENST00000366860 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
CNIH4-204ENST00000366860 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
CNIH4-204ENST00000366860 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
CNIH4-204ENST00000366860 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CNIH4-204ENST00000366860 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
CNIH4-204ENST00000366860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
CNIH4-204ENST00000366860 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CNIH4-204ENST00000366860 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
CNIH4-204ENST00000366860 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CNIH4-204ENST00000366860 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
CNIH4-204ENST00000366860 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
CNIH4-204ENST00000366860 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
CNIH4-204ENST00000366860 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
CNIH4-204ENST00000366860 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
CNIH4-204ENST00000366860 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
CNIH4-204ENST00000366860 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
CNIH4-204ENST00000366860 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
CNIH4-204ENST00000366860 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
CNIH4-204ENST00000366860 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
CNIH4-204ENST00000366860 INE1O15225 51 aa3.62□□□□□ -1.83
CNIH4-204ENST00000366860 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CNIH4-204ENST00000366860 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CNIH4-204ENST00000366860 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
CNIH4-204ENST00000366860 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
CNIH4-204ENST00000366860 PRM1P04553 51 aa3.16□□□□□ -1.9
CNIH4-204ENST00000366860 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CNIH4-204ENST00000366860 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
CNIH4-204ENST00000366860 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
CNIH4-204ENST00000366860 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CNIH4-204ENST00000366860 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms