RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
RNU1-55P-201ENST00000365510 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
RNU1-55P-201ENST00000365510 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
RNU1-55P-201ENST00000365510 KRTAP23-1A1A580 65 aa2.59□□□□□ -1.99
RNU1-55P-201ENST00000365510 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
RNU1-55P-201ENST00000365510 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
RNU1-55P-201ENST00000365510 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
RNU1-55P-201ENST00000365510 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
RNU1-55P-201ENST00000365510 PRAC1Q96KF2 57 aa2.53□□□□□ -2
RNU1-55P-201ENST00000365510 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
RNU1-55P-201ENST00000365510 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
RNU1-55P-201ENST00000365510 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
RNU1-55P-201ENST00000365510 MT1EP04732 61 aa2.49□□□□□ -2.01
RNU1-55P-201ENST00000365510 SVIPQ8NHG7 77 aa2.46□□□□□ -2.02
RNU1-55P-201ENST00000365510 KRTAP15-1Q3LI76 137 aa2.42□□□□□ -2.02
RNU1-55P-201ENST00000365510 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
RNU1-55P-201ENST00000365510 MT1LQ93083 61 aa2.42□□□□□ -2.02
RNU1-55P-201ENST00000365510 MT4P47944 62 aa2.41□□□□□ -2.02
RNU1-55P-201ENST00000365510 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
RNU1-55P-201ENST00000365510 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
RNU1-55P-201ENST00000365510 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
RNU1-55P-201ENST00000365510 LCE5AQ5TCM9 118 aa2.39□□□□□ -2.03
RNU1-55P-201ENST00000365510 MT1GP13640 62 aa2.38□□□□□ -2.03
RNU1-55P-201ENST00000365510 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
RNU1-55P-201ENST00000365510 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
RNU1-55P-201ENST00000365510 MT1MQ8N339 61 aa2.34□□□□□ -2.03
RNU1-55P-201ENST00000365510 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
RNU1-55P-201ENST00000365510 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
RNU1-55P-201ENST00000365510 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
RNU1-55P-201ENST00000365510 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
RNU1-55P-201ENST00000365510 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
RNU1-55P-201ENST00000365510 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
RNU1-55P-201ENST00000365510 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
RNU1-55P-201ENST00000365510 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
RNU1-55P-201ENST00000365510 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
RNU1-55P-201ENST00000365510 LOC100996750A0A140TA64 210 aa2.16□□□□□ -2.06
RNU1-55P-201ENST00000365510 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
RNU1-55P-201ENST00000365510 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
RNU1-55P-201ENST00000365510 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
RNU1-55P-201ENST00000365510 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
RNU1-55P-201ENST00000365510 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
RNU1-55P-201ENST00000365510 MT1AP04731 61 aa2.06□□□□□ -2.08
RNU1-55P-201ENST00000365510 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
RNU1-55P-201ENST00000365510 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
RNU1-55P-201ENST00000365510 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
RNU1-55P-201ENST00000365510 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
RNU1-55P-201ENST00000365510 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
RNU1-55P-201ENST00000365510 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.09
RNU1-55P-201ENST00000365510 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
RNU1-55P-201ENST00000365510 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
RNU1-55P-201ENST00000365510 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
RNU1-55P-201ENST00000365510 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
RNU1-55P-201ENST00000365510 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
RNU1-55P-201ENST00000365510 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
RNU1-55P-201ENST00000365510 MT3P25713 68 aa1.88□□□□□ -2.11
RNU1-55P-201ENST00000365510 KRTAP9-9Q9BYP9 154 aa1.85□□□□□ -2.11
RNU1-55P-201ENST00000365510 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
RNU1-55P-201ENST00000365510 A0A0A0MQY5 61 aa1.73□□□□□ -2.13
RNU1-55P-201ENST00000365510 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
RNU1-55P-201ENST00000365510 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
RNU1-55P-201ENST00000365510 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
RNU1-55P-201ENST00000365510 INE1O15225 51 aa1.64□□□□□ -2.15
RNU1-55P-201ENST00000365510 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
RNU1-55P-201ENST00000365510 KRTAP4-12Q9BQ66 201 aa1.61□□□□□ -2.15
RNU1-55P-201ENST00000365510 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
RNU1-55P-201ENST00000365510 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
RNU1-55P-201ENST00000365510 H3BS24 57 aa1.52□□□□□ -2.17
RNU1-55P-201ENST00000365510 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
RNU1-55P-201ENST00000365510 PRM1P04553 51 aa1.41□□□□□ -2.18
RNU1-55P-201ENST00000365510 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
RNU1-55P-201ENST00000365510 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
RNU1-55P-201ENST00000365510 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
RNU1-55P-201ENST00000365510 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
RNU1-55P-201ENST00000365510 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
RNU1-55P-201ENST00000365510 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
RNU1-55P-201ENST00000365510 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
RNU1-55P-201ENST00000365510 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 145.8 ms