RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
PDE4D-205ENST00000360047 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
PDE4D-205ENST00000360047 MT1FP04733 61 aa2.2□□□□□ -2.06
PDE4D-205ENST00000360047 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
PDE4D-205ENST00000360047 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
PDE4D-205ENST00000360047 NEBP20929 6669 aa2.16□□□□□ -2.06
PDE4D-205ENST00000360047 MT3P25713 68 aa2.15□□□□□ -2.06
PDE4D-205ENST00000360047 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
PDE4D-205ENST00000360047 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
PDE4D-205ENST00000360047 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
PDE4D-205ENST00000360047 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
PDE4D-205ENST00000360047 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
PDE4D-205ENST00000360047 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
PDE4D-205ENST00000360047 FSIP2Q5CZC0 6907 aa2.09□□□□□ -2.07
PDE4D-205ENST00000360047 USH2AO75445 5202 aa2.07□□□□□ -2.08
PDE4D-205ENST00000360047 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
PDE4D-205ENST00000360047 TNP1P09430 55 aa2.05□□□□□ -2.08
PDE4D-205ENST00000360047 MT1BP07438 61 aa2.04□□□□□ -2.08
PDE4D-205ENST00000360047 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
PDE4D-205ENST00000360047 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
PDE4D-205ENST00000360047 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
PDE4D-205ENST00000360047 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
PDE4D-205ENST00000360047 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
PDE4D-205ENST00000360047 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
PDE4D-205ENST00000360047 MT1XP80297 61 aa1.95□□□□□ -2.1
PDE4D-205ENST00000360047 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
PDE4D-205ENST00000360047 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
PDE4D-205ENST00000360047 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
PDE4D-205ENST00000360047 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
PDE4D-205ENST00000360047 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
PDE4D-205ENST00000360047 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
PDE4D-205ENST00000360047 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
PDE4D-205ENST00000360047 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
PDE4D-205ENST00000360047 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
PDE4D-205ENST00000360047 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
PDE4D-205ENST00000360047 KRTAP10-12P60413 245 aa1.85□□□□□ -2.11
PDE4D-205ENST00000360047 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
PDE4D-205ENST00000360047 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
PDE4D-205ENST00000360047 KMT2DO14686 5537 aa1.81□□□□□ -2.12
PDE4D-205ENST00000360047 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
PDE4D-205ENST00000360047 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
PDE4D-205ENST00000360047 SPRR2EP22531 72 aa1.77□□□□□ -2.13
PDE4D-205ENST00000360047 SPRR2BP35325 72 aa1.77□□□□□ -2.13
PDE4D-205ENST00000360047 SPRR2AP35326 72 aa1.77□□□□□ -2.13
PDE4D-205ENST00000360047 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
PDE4D-205ENST00000360047 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
PDE4D-205ENST00000360047 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
PDE4D-205ENST00000360047 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
PDE4D-205ENST00000360047 MT1EP04732 61 aa1.72□□□□□ -2.13
PDE4D-205ENST00000360047 SPRR2DP22532 72 aa1.71□□□□□ -2.14
PDE4D-205ENST00000360047 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
PDE4D-205ENST00000360047 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
PDE4D-205ENST00000360047 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
PDE4D-205ENST00000360047 MT1GP13640 62 aa1.68□□□□□ -2.14
PDE4D-205ENST00000360047 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
PDE4D-205ENST00000360047 MT1LQ93083 61 aa1.67□□□□□ -2.14
PDE4D-205ENST00000360047 MT1MQ8N339 61 aa1.64□□□□□ -2.15
PDE4D-205ENST00000360047 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.15
PDE4D-205ENST00000360047 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
PDE4D-205ENST00000360047 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
PDE4D-205ENST00000360047 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
PDE4D-205ENST00000360047 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
PDE4D-205ENST00000360047 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
PDE4D-205ENST00000360047 MT4P47944 62 aa1.49□□□□□ -2.17
PDE4D-205ENST00000360047 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
PDE4D-205ENST00000360047 PRM1P04553 51 aa1.45□□□□□ -2.18
PDE4D-205ENST00000360047 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
PDE4D-205ENST00000360047 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
PDE4D-205ENST00000360047 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
PDE4D-205ENST00000360047 MT1AP04731 61 aa1.43□□□□□ -2.18
PDE4D-205ENST00000360047 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.18
PDE4D-205ENST00000360047 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
PDE4D-205ENST00000360047 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
PDE4D-205ENST00000360047 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
PDE4D-205ENST00000360047 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
PDE4D-205ENST00000360047 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
PDE4D-205ENST00000360047 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms