RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 INE1O15225 51 aa5.54□□□□□ -1.52
CSNK1E-201ENST00000359867 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
CSNK1E-201ENST00000359867 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
CSNK1E-201ENST00000359867 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
CSNK1E-201ENST00000359867 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CSNK1E-201ENST00000359867 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.55
CSNK1E-201ENST00000359867 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CSNK1E-201ENST00000359867 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
CSNK1E-201ENST00000359867 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
CSNK1E-201ENST00000359867 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
CSNK1E-201ENST00000359867 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
CSNK1E-201ENST00000359867 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
CSNK1E-201ENST00000359867 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
CSNK1E-201ENST00000359867 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
CSNK1E-201ENST00000359867 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CSNK1E-201ENST00000359867 KRTAP5-9P26371 169 aa5□□□□□ -1.61
CSNK1E-201ENST00000359867 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
CSNK1E-201ENST00000359867 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CSNK1E-201ENST00000359867 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
CSNK1E-201ENST00000359867 MT1EP04732 61 aa4.95□□□□□ -1.62
CSNK1E-201ENST00000359867 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
CSNK1E-201ENST00000359867 MT1LQ93083 61 aa4.86□□□□□ -1.63
CSNK1E-201ENST00000359867 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
CSNK1E-201ENST00000359867 SPRR2EP22531 72 aa4.83□□□□□ -1.64
CSNK1E-201ENST00000359867 SPRR2BP35325 72 aa4.83□□□□□ -1.64
CSNK1E-201ENST00000359867 SPRR2AP35326 72 aa4.83□□□□□ -1.64
CSNK1E-201ENST00000359867 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
CSNK1E-201ENST00000359867 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
CSNK1E-201ENST00000359867 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
CSNK1E-201ENST00000359867 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
CSNK1E-201ENST00000359867 NEBP20929 6669 aa4.76□□□□□ -1.65
CSNK1E-201ENST00000359867 MT1GP13640 62 aa4.72□□□□□ -1.65
CSNK1E-201ENST00000359867 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
CSNK1E-201ENST00000359867 MT1MQ8N339 61 aa4.68□□□□□ -1.66
CSNK1E-201ENST00000359867 SPRR2DP22532 72 aa4.65□□□□□ -1.67
CSNK1E-201ENST00000359867 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
CSNK1E-201ENST00000359867 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CSNK1E-201ENST00000359867 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CSNK1E-201ENST00000359867 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
CSNK1E-201ENST00000359867 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
CSNK1E-201ENST00000359867 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
CSNK1E-201ENST00000359867 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CSNK1E-201ENST00000359867 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
CSNK1E-201ENST00000359867 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
CSNK1E-201ENST00000359867 MT1AP04731 61 aa4.13□□□□□ -1.75
CSNK1E-201ENST00000359867 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
CSNK1E-201ENST00000359867 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
CSNK1E-201ENST00000359867 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CSNK1E-201ENST00000359867 MT4P47944 62 aa4.08□□□□□ -1.76
CSNK1E-201ENST00000359867 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
CSNK1E-201ENST00000359867 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
CSNK1E-201ENST00000359867 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CSNK1E-201ENST00000359867 PRM1P04553 51 aa3.88□□□□□ -1.79
CSNK1E-201ENST00000359867 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
CSNK1E-201ENST00000359867 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
CSNK1E-201ENST00000359867 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
CSNK1E-201ENST00000359867 MT3P25713 68 aa3.74□□□□□ -1.81
CSNK1E-201ENST00000359867 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
CSNK1E-201ENST00000359867 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CSNK1E-201ENST00000359867 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
CSNK1E-201ENST00000359867 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
CSNK1E-201ENST00000359867 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CSNK1E-201ENST00000359867 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
CSNK1E-201ENST00000359867 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
CSNK1E-201ENST00000359867 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CSNK1E-201ENST00000359867 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
CSNK1E-201ENST00000359867 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CSNK1E-201ENST00000359867 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CSNK1E-201ENST00000359867 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
CSNK1E-201ENST00000359867 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
CSNK1E-201ENST00000359867 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
CSNK1E-201ENST00000359867 LCE1CQ5T751 118 aa3.03□□□□□ -1.93
CSNK1E-201ENST00000359867 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
CSNK1E-201ENST00000359867 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
CSNK1E-201ENST00000359867 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
CSNK1E-201ENST00000359867 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CSNK1E-201ENST00000359867 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 263.9 ms