RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
FDPS-201ENST00000356657 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
FDPS-201ENST00000356657 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
FDPS-201ENST00000356657 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
FDPS-201ENST00000356657 MT1EP04732 61 aa5.91□□□□□ -1.46
FDPS-201ENST00000356657 SPRR2DP22532 72 aa5.9□□□□□ -1.46
FDPS-201ENST00000356657 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
FDPS-201ENST00000356657 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
FDPS-201ENST00000356657 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
FDPS-201ENST00000356657 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
FDPS-201ENST00000356657 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
FDPS-201ENST00000356657 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
FDPS-201ENST00000356657 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
FDPS-201ENST00000356657 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
FDPS-201ENST00000356657 MT1GP13640 62 aa5.73□□□□□ -1.49
FDPS-201ENST00000356657 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
FDPS-201ENST00000356657 MT1LQ93083 61 aa5.71□□□□□ -1.49
FDPS-201ENST00000356657 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
FDPS-201ENST00000356657 MT1MQ8N339 61 aa5.59□□□□□ -1.51
FDPS-201ENST00000356657 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
FDPS-201ENST00000356657 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
FDPS-201ENST00000356657 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
FDPS-201ENST00000356657 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
FDPS-201ENST00000356657 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
FDPS-201ENST00000356657 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
FDPS-201ENST00000356657 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
FDPS-201ENST00000356657 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
FDPS-201ENST00000356657 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
FDPS-201ENST00000356657 MT4P47944 62 aa5.16□□□□□ -1.58
FDPS-201ENST00000356657 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
FDPS-201ENST00000356657 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.58
FDPS-201ENST00000356657 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
FDPS-201ENST00000356657 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
FDPS-201ENST00000356657 H3BS24 57 aa5.07□□□□□ -1.6
FDPS-201ENST00000356657 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
FDPS-201ENST00000356657 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
FDPS-201ENST00000356657 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
FDPS-201ENST00000356657 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
FDPS-201ENST00000356657 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
FDPS-201ENST00000356657 MT1AP04731 61 aa4.89□□□□□ -1.63
FDPS-201ENST00000356657 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
FDPS-201ENST00000356657 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
FDPS-201ENST00000356657 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
FDPS-201ENST00000356657 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
FDPS-201ENST00000356657 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
FDPS-201ENST00000356657 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
FDPS-201ENST00000356657 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
FDPS-201ENST00000356657 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
FDPS-201ENST00000356657 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
FDPS-201ENST00000356657 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
FDPS-201ENST00000356657 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
FDPS-201ENST00000356657 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
FDPS-201ENST00000356657 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
FDPS-201ENST00000356657 MT3P25713 68 aa4.48□□□□□ -1.69
FDPS-201ENST00000356657 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
FDPS-201ENST00000356657 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
FDPS-201ENST00000356657 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
FDPS-201ENST00000356657 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
FDPS-201ENST00000356657 INE1O15225 51 aa4.03□□□□□ -1.76
FDPS-201ENST00000356657 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
FDPS-201ENST00000356657 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
FDPS-201ENST00000356657 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
FDPS-201ENST00000356657 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
FDPS-201ENST00000356657 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
FDPS-201ENST00000356657 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
FDPS-201ENST00000356657 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
FDPS-201ENST00000356657 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
FDPS-201ENST00000356657 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
FDPS-201ENST00000356657 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
FDPS-201ENST00000356657 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
FDPS-201ENST00000356657 PRM1P04553 51 aa3.16□□□□□ -1.9
FDPS-201ENST00000356657 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
FDPS-201ENST00000356657 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
FDPS-201ENST00000356657 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
FDPS-201ENST00000356657 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
FDPS-201ENST00000356657 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
FDPS-201ENST00000356657 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms