RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
PDLIM7-201ENST00000355572 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
PDLIM7-201ENST00000355572 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
PDLIM7-201ENST00000355572 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
PDLIM7-201ENST00000355572 ROMO1P60602 79 aa6.11□□□□□ -1.43
PDLIM7-201ENST00000355572 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
PDLIM7-201ENST00000355572 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
PDLIM7-201ENST00000355572 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
PDLIM7-201ENST00000355572 MT1GP13640 62 aa5.98□□□□□ -1.45
PDLIM7-201ENST00000355572 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
PDLIM7-201ENST00000355572 MT1MQ8N339 61 aa5.97□□□□□ -1.45
PDLIM7-201ENST00000355572 MT1LQ93083 61 aa5.97□□□□□ -1.45
PDLIM7-201ENST00000355572 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
PDLIM7-201ENST00000355572 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
PDLIM7-201ENST00000355572 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
PDLIM7-201ENST00000355572 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
PDLIM7-201ENST00000355572 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
PDLIM7-201ENST00000355572 TNP1P09430 55 aa5.82□□□□□ -1.48
PDLIM7-201ENST00000355572 MT4P47944 62 aa5.78□□□□□ -1.48
PDLIM7-201ENST00000355572 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
PDLIM7-201ENST00000355572 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
PDLIM7-201ENST00000355572 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
PDLIM7-201ENST00000355572 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
PDLIM7-201ENST00000355572 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
PDLIM7-201ENST00000355572 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
PDLIM7-201ENST00000355572 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PDLIM7-201ENST00000355572 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
PDLIM7-201ENST00000355572 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
PDLIM7-201ENST00000355572 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
PDLIM7-201ENST00000355572 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
PDLIM7-201ENST00000355572 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
PDLIM7-201ENST00000355572 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
PDLIM7-201ENST00000355572 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
PDLIM7-201ENST00000355572 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
PDLIM7-201ENST00000355572 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PDLIM7-201ENST00000355572 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
PDLIM7-201ENST00000355572 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
PDLIM7-201ENST00000355572 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
PDLIM7-201ENST00000355572 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
PDLIM7-201ENST00000355572 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
PDLIM7-201ENST00000355572 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
PDLIM7-201ENST00000355572 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
PDLIM7-201ENST00000355572 MT1AP04731 61 aa5.05□□□□□ -1.6
PDLIM7-201ENST00000355572 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
PDLIM7-201ENST00000355572 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
PDLIM7-201ENST00000355572 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
PDLIM7-201ENST00000355572 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
PDLIM7-201ENST00000355572 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
PDLIM7-201ENST00000355572 H3BS24 57 aa4.81□□□□□ -1.64
PDLIM7-201ENST00000355572 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
PDLIM7-201ENST00000355572 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
PDLIM7-201ENST00000355572 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
PDLIM7-201ENST00000355572 MT3P25713 68 aa4.56□□□□□ -1.68
PDLIM7-201ENST00000355572 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
PDLIM7-201ENST00000355572 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
PDLIM7-201ENST00000355572 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
PDLIM7-201ENST00000355572 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
PDLIM7-201ENST00000355572 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
PDLIM7-201ENST00000355572 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
PDLIM7-201ENST00000355572 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
PDLIM7-201ENST00000355572 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
PDLIM7-201ENST00000355572 INE1O15225 51 aa4.09□□□□□ -1.75
PDLIM7-201ENST00000355572 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
PDLIM7-201ENST00000355572 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
PDLIM7-201ENST00000355572 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
PDLIM7-201ENST00000355572 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
PDLIM7-201ENST00000355572 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PDLIM7-201ENST00000355572 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
PDLIM7-201ENST00000355572 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
PDLIM7-201ENST00000355572 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
PDLIM7-201ENST00000355572 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
PDLIM7-201ENST00000355572 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
PDLIM7-201ENST00000355572 PRM1P04553 51 aa3.15□□□□□ -1.91
PDLIM7-201ENST00000355572 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
PDLIM7-201ENST00000355572 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PDLIM7-201ENST00000355572 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
PDLIM7-201ENST00000355572 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 108 ms