RNA–Protein interactions for RNA: ENST00000348761.2

CNTN1-202, Transcript of contactin 1, humanhuman

TSL 1 (best) BASIC

Gene CNTN1, Length 3,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-202ENST00000348761 TNP1P09430 55 aa2.17□□□□□ -2.06
CNTN1-202ENST00000348761 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
CNTN1-202ENST00000348761 MT3P25713 68 aa2.15□□□□□ -2.07
CNTN1-202ENST00000348761 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
CNTN1-202ENST00000348761 USH2AO75445 5202 aa2.14□□□□□ -2.07
CNTN1-202ENST00000348761 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
CNTN1-202ENST00000348761 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
CNTN1-202ENST00000348761 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
CNTN1-202ENST00000348761 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
CNTN1-202ENST00000348761 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
CNTN1-202ENST00000348761 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
CNTN1-202ENST00000348761 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
CNTN1-202ENST00000348761 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
CNTN1-202ENST00000348761 MT2AP02795 61 aa2.06□□□□□ -2.08
CNTN1-202ENST00000348761 MT1FP04733 61 aa2.04□□□□□ -2.08
CNTN1-202ENST00000348761 SYNE2Q8WXH0 6885 aaKnown RBP2.02□□□□□ -2.09
CNTN1-202ENST00000348761 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
CNTN1-202ENST00000348761 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
CNTN1-202ENST00000348761 SPRR2GQ9BYE4 73 aa1.99□□□□□ -2.09
CNTN1-202ENST00000348761 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
CNTN1-202ENST00000348761 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
CNTN1-202ENST00000348761 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
CNTN1-202ENST00000348761 KRTAP10-5P60370 271 aa1.9□□□□□ -2.11
CNTN1-202ENST00000348761 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
CNTN1-202ENST00000348761 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
CNTN1-202ENST00000348761 MUC12Q9UKN1 5478 aa1.89□□□□□ -2.11
CNTN1-202ENST00000348761 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
CNTN1-202ENST00000348761 MT1BP07438 61 aa1.87□□□□□ -2.11
CNTN1-202ENST00000348761 NEBP20929 6669 aa1.85□□□□□ -2.11
CNTN1-202ENST00000348761 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
CNTN1-202ENST00000348761 KMT2DO14686 5537 aa1.84□□□□□ -2.11
CNTN1-202ENST00000348761 MT1XP80297 61 aa1.76□□□□□ -2.13
CNTN1-202ENST00000348761 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
CNTN1-202ENST00000348761 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
CNTN1-202ENST00000348761 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 SPRR2EP22531 72 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 SPRR2BP35325 72 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 SPRR2AP35326 72 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
CNTN1-202ENST00000348761 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CNTN1-202ENST00000348761 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
CNTN1-202ENST00000348761 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
CNTN1-202ENST00000348761 SPRR2DP22532 72 aa1.63□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
CNTN1-202ENST00000348761 MT1EP04732 61 aa1.6□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
CNTN1-202ENST00000348761 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
CNTN1-202ENST00000348761 PRM1P04553 51 aa1.56□□□□□ -2.16
CNTN1-202ENST00000348761 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
CNTN1-202ENST00000348761 MT1LQ93083 61 aa1.53□□□□□ -2.16
CNTN1-202ENST00000348761 MT1GP13640 62 aa1.51□□□□□ -2.17
CNTN1-202ENST00000348761 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
CNTN1-202ENST00000348761 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
CNTN1-202ENST00000348761 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
CNTN1-202ENST00000348761 MT1MQ8N339 61 aa1.48□□□□□ -2.17
CNTN1-202ENST00000348761 SYNE1Q8NF91 8797 aaKnown RBP1.45□□□□□ -2.18
CNTN1-202ENST00000348761 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
CNTN1-202ENST00000348761 KRTAP4-3Q9BYR4 195 aa1.45□□□□□ -2.18
CNTN1-202ENST00000348761 MT4P47944 62 aa1.44□□□□□ -2.18
CNTN1-202ENST00000348761 MT1AP04731 61 aa1.43□□□□□ -2.18
CNTN1-202ENST00000348761 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
CNTN1-202ENST00000348761 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
CNTN1-202ENST00000348761 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
CNTN1-202ENST00000348761 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
CNTN1-202ENST00000348761 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
CNTN1-202ENST00000348761 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.21
CNTN1-202ENST00000348761 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
CNTN1-202ENST00000348761 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CNTN1-202ENST00000348761 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
CNTN1-202ENST00000348761 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
CNTN1-202ENST00000348761 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 60.4 ms