RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
MRPL55-204ENST00000348259 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
MRPL55-204ENST00000348259 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
MRPL55-204ENST00000348259 TNP1P09430 55 aa3.9□□□□□ -1.79
MRPL55-204ENST00000348259 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
MRPL55-204ENST00000348259 H3BS24 57 aa3.88□□□□□ -1.79
MRPL55-204ENST00000348259 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
MRPL55-204ENST00000348259 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
MRPL55-204ENST00000348259 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
MRPL55-204ENST00000348259 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
MRPL55-204ENST00000348259 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
MRPL55-204ENST00000348259 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
MRPL55-204ENST00000348259 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
MRPL55-204ENST00000348259 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
MRPL55-204ENST00000348259 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
MRPL55-204ENST00000348259 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
MRPL55-204ENST00000348259 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
MRPL55-204ENST00000348259 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
MRPL55-204ENST00000348259 MT1EP04732 61 aa3.59□□□□□ -1.83
MRPL55-204ENST00000348259 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
MRPL55-204ENST00000348259 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
MRPL55-204ENST00000348259 MT4P47944 62 aa3.53□□□□□ -1.84
MRPL55-204ENST00000348259 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
MRPL55-204ENST00000348259 MT1GP13640 62 aa3.47□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
MRPL55-204ENST00000348259 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
MRPL55-204ENST00000348259 MT1MQ8N339 61 aa3.43□□□□□ -1.86
MRPL55-204ENST00000348259 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
MRPL55-204ENST00000348259 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
MRPL55-204ENST00000348259 MT1LQ93083 61 aa3.37□□□□□ -1.87
MRPL55-204ENST00000348259 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
MRPL55-204ENST00000348259 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
MRPL55-204ENST00000348259 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
MRPL55-204ENST00000348259 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
MRPL55-204ENST00000348259 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
MRPL55-204ENST00000348259 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
MRPL55-204ENST00000348259 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
MRPL55-204ENST00000348259 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
MRPL55-204ENST00000348259 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
MRPL55-204ENST00000348259 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
MRPL55-204ENST00000348259 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
MRPL55-204ENST00000348259 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
MRPL55-204ENST00000348259 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
MRPL55-204ENST00000348259 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
MRPL55-204ENST00000348259 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
MRPL55-204ENST00000348259 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
MRPL55-204ENST00000348259 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
MRPL55-204ENST00000348259 INE1O15225 51 aa2.94□□□□□ -1.94
MRPL55-204ENST00000348259 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
MRPL55-204ENST00000348259 MT1AP04731 61 aa2.88□□□□□ -1.95
MRPL55-204ENST00000348259 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
MRPL55-204ENST00000348259 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
MRPL55-204ENST00000348259 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
MRPL55-204ENST00000348259 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
MRPL55-204ENST00000348259 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
MRPL55-204ENST00000348259 MT3P25713 68 aa2.63□□□□□ -1.99
MRPL55-204ENST00000348259 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
MRPL55-204ENST00000348259 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
MRPL55-204ENST00000348259 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
MRPL55-204ENST00000348259 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
MRPL55-204ENST00000348259 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
MRPL55-204ENST00000348259 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
MRPL55-204ENST00000348259 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
MRPL55-204ENST00000348259 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
MRPL55-204ENST00000348259 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
MRPL55-204ENST00000348259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
MRPL55-204ENST00000348259 PRM1P04553 51 aa2.11□□□□□ -2.07
MRPL55-204ENST00000348259 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
MRPL55-204ENST00000348259 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
MRPL55-204ENST00000348259 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
MRPL55-204ENST00000348259 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
MRPL55-204ENST00000348259 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
MRPL55-204ENST00000348259 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms