RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
ATG4B-201ENST00000344376 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
ATG4B-201ENST00000344376 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
ATG4B-201ENST00000344376 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
ATG4B-201ENST00000344376 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
ATG4B-201ENST00000344376 MT1EP04732 61 aa5.98□□□□□ -1.45
ATG4B-201ENST00000344376 H3BS24 57 aa5.97□□□□□ -1.45
ATG4B-201ENST00000344376 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
ATG4B-201ENST00000344376 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
ATG4B-201ENST00000344376 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
ATG4B-201ENST00000344376 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
ATG4B-201ENST00000344376 TNP1P09430 55 aa5.88□□□□□ -1.47
ATG4B-201ENST00000344376 MT1GP13640 62 aa5.8□□□□□ -1.48
ATG4B-201ENST00000344376 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
ATG4B-201ENST00000344376 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
ATG4B-201ENST00000344376 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
ATG4B-201ENST00000344376 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
ATG4B-201ENST00000344376 MT1LQ93083 61 aa5.72□□□□□ -1.49
ATG4B-201ENST00000344376 MT1MQ8N339 61 aa5.69□□□□□ -1.5
ATG4B-201ENST00000344376 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
ATG4B-201ENST00000344376 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
ATG4B-201ENST00000344376 KRTAP12-3P60328 96 aa5.59□□□□□ -1.52
ATG4B-201ENST00000344376 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
ATG4B-201ENST00000344376 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
ATG4B-201ENST00000344376 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
ATG4B-201ENST00000344376 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
ATG4B-201ENST00000344376 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
ATG4B-201ENST00000344376 MT4P47944 62 aa5.44□□□□□ -1.54
ATG4B-201ENST00000344376 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
ATG4B-201ENST00000344376 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.54
ATG4B-201ENST00000344376 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
ATG4B-201ENST00000344376 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
ATG4B-201ENST00000344376 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
ATG4B-201ENST00000344376 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
ATG4B-201ENST00000344376 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
ATG4B-201ENST00000344376 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
ATG4B-201ENST00000344376 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
ATG4B-201ENST00000344376 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
ATG4B-201ENST00000344376 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
ATG4B-201ENST00000344376 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
ATG4B-201ENST00000344376 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
ATG4B-201ENST00000344376 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
ATG4B-201ENST00000344376 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
ATG4B-201ENST00000344376 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
ATG4B-201ENST00000344376 MT1AP04731 61 aa4.88□□□□□ -1.63
ATG4B-201ENST00000344376 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
ATG4B-201ENST00000344376 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
ATG4B-201ENST00000344376 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
ATG4B-201ENST00000344376 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
ATG4B-201ENST00000344376 INE1O15225 51 aa4.72□□□□□ -1.65
ATG4B-201ENST00000344376 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
ATG4B-201ENST00000344376 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
ATG4B-201ENST00000344376 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
ATG4B-201ENST00000344376 MT3P25713 68 aa4.48□□□□□ -1.69
ATG4B-201ENST00000344376 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
ATG4B-201ENST00000344376 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
ATG4B-201ENST00000344376 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
ATG4B-201ENST00000344376 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
ATG4B-201ENST00000344376 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
ATG4B-201ENST00000344376 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
ATG4B-201ENST00000344376 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
ATG4B-201ENST00000344376 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
ATG4B-201ENST00000344376 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
ATG4B-201ENST00000344376 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.8
ATG4B-201ENST00000344376 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
ATG4B-201ENST00000344376 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
ATG4B-201ENST00000344376 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ATG4B-201ENST00000344376 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.85
ATG4B-201ENST00000344376 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
ATG4B-201ENST00000344376 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
ATG4B-201ENST00000344376 PRM1P04553 51 aa3.35□□□□□ -1.87
ATG4B-201ENST00000344376 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
ATG4B-201ENST00000344376 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
ATG4B-201ENST00000344376 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
ATG4B-201ENST00000344376 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
ATG4B-201ENST00000344376 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
ATG4B-201ENST00000344376 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
ATG4B-201ENST00000344376 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms