RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
CDHR4-201ENST00000343366 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
CDHR4-201ENST00000343366 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
CDHR4-201ENST00000343366 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
CDHR4-201ENST00000343366 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
CDHR4-201ENST00000343366 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
CDHR4-201ENST00000343366 MT1EP04732 61 aa6.88□□□□□ -1.31
CDHR4-201ENST00000343366 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
CDHR4-201ENST00000343366 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
CDHR4-201ENST00000343366 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
CDHR4-201ENST00000343366 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
CDHR4-201ENST00000343366 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
CDHR4-201ENST00000343366 HMCN1Q96RW7 5635 aa6.75□□□□□ -1.33
CDHR4-201ENST00000343366 MT1GP13640 62 aa6.71□□□□□ -1.34
CDHR4-201ENST00000343366 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
CDHR4-201ENST00000343366 PMAIP1Q13794 54 aa6.69□□□□□ -1.34
CDHR4-201ENST00000343366 MT1LQ93083 61 aa6.67□□□□□ -1.34
CDHR4-201ENST00000343366 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.34
CDHR4-201ENST00000343366 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
CDHR4-201ENST00000343366 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
CDHR4-201ENST00000343366 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
CDHR4-201ENST00000343366 MT4P47944 62 aa6.53□□□□□ -1.36
CDHR4-201ENST00000343366 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
CDHR4-201ENST00000343366 MT1MQ8N339 61 aa6.52□□□□□ -1.37
CDHR4-201ENST00000343366 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.38
CDHR4-201ENST00000343366 KRTAP5-4Q6L8H1 288 aa6.42□□□□□ -1.38
CDHR4-201ENST00000343366 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
CDHR4-201ENST00000343366 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
CDHR4-201ENST00000343366 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
CDHR4-201ENST00000343366 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
CDHR4-201ENST00000343366 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
CDHR4-201ENST00000343366 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
CDHR4-201ENST00000343366 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
CDHR4-201ENST00000343366 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
CDHR4-201ENST00000343366 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
CDHR4-201ENST00000343366 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
CDHR4-201ENST00000343366 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
CDHR4-201ENST00000343366 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
CDHR4-201ENST00000343366 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
CDHR4-201ENST00000343366 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
CDHR4-201ENST00000343366 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
CDHR4-201ENST00000343366 MT1AP04731 61 aa5.71□□□□□ -1.5
CDHR4-201ENST00000343366 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
CDHR4-201ENST00000343366 MUC5ACP98088 5654 aa5.65□□□□□ -1.5
CDHR4-201ENST00000343366 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.51
CDHR4-201ENST00000343366 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
CDHR4-201ENST00000343366 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
CDHR4-201ENST00000343366 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
CDHR4-201ENST00000343366 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
CDHR4-201ENST00000343366 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
CDHR4-201ENST00000343366 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
CDHR4-201ENST00000343366 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
CDHR4-201ENST00000343366 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
CDHR4-201ENST00000343366 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
CDHR4-201ENST00000343366 MT3P25713 68 aa5.24□□□□□ -1.57
CDHR4-201ENST00000343366 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
CDHR4-201ENST00000343366 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
CDHR4-201ENST00000343366 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
CDHR4-201ENST00000343366 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
CDHR4-201ENST00000343366 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
CDHR4-201ENST00000343366 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CDHR4-201ENST00000343366 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
CDHR4-201ENST00000343366 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
CDHR4-201ENST00000343366 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CDHR4-201ENST00000343366 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CDHR4-201ENST00000343366 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
CDHR4-201ENST00000343366 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
CDHR4-201ENST00000343366 H3BS24 57 aa3.99□□□□□ -1.77
CDHR4-201ENST00000343366 INE1O15225 51 aa3.96□□□□□ -1.78
CDHR4-201ENST00000343366 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CDHR4-201ENST00000343366 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
CDHR4-201ENST00000343366 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CDHR4-201ENST00000343366 PRM1P04553 51 aa3.58□□□□□ -1.84
CDHR4-201ENST00000343366 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CDHR4-201ENST00000343366 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CDHR4-201ENST00000343366 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CDHR4-201ENST00000343366 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 315.3 ms