RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
SLC28A1-202ENST00000338602 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SLC28A1-202ENST00000338602 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
SLC28A1-202ENST00000338602 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
SLC28A1-202ENST00000338602 ROMO1P60602 79 aa4.29□□□□□ -1.72
SLC28A1-202ENST00000338602 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
SLC28A1-202ENST00000338602 TNP1P09430 55 aa4.27□□□□□ -1.73
SLC28A1-202ENST00000338602 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
SLC28A1-202ENST00000338602 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
SLC28A1-202ENST00000338602 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
SLC28A1-202ENST00000338602 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
SLC28A1-202ENST00000338602 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
SLC28A1-202ENST00000338602 MT1EP04732 61 aa4.19□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.74
SLC28A1-202ENST00000338602 PRAC1Q96KF2 57 aa4.15□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
SLC28A1-202ENST00000338602 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SLC28A1-202ENST00000338602 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
SLC28A1-202ENST00000338602 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
SLC28A1-202ENST00000338602 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
SLC28A1-202ENST00000338602 MT1GP13640 62 aa4.09□□□□□ -1.75
SLC28A1-202ENST00000338602 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
SLC28A1-202ENST00000338602 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
SLC28A1-202ENST00000338602 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SLC28A1-202ENST00000338602 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
SLC28A1-202ENST00000338602 MT1LQ93083 61 aa4.02□□□□□ -1.77
SLC28A1-202ENST00000338602 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
SLC28A1-202ENST00000338602 MT1MQ8N339 61 aa3.99□□□□□ -1.77
SLC28A1-202ENST00000338602 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SLC28A1-202ENST00000338602 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SLC28A1-202ENST00000338602 MT4P47944 62 aa3.93□□□□□ -1.78
SLC28A1-202ENST00000338602 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
SLC28A1-202ENST00000338602 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.78
SLC28A1-202ENST00000338602 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
SLC28A1-202ENST00000338602 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
SLC28A1-202ENST00000338602 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
SLC28A1-202ENST00000338602 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
SLC28A1-202ENST00000338602 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SLC28A1-202ENST00000338602 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
SLC28A1-202ENST00000338602 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
SLC28A1-202ENST00000338602 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SLC28A1-202ENST00000338602 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SLC28A1-202ENST00000338602 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
SLC28A1-202ENST00000338602 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
SLC28A1-202ENST00000338602 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
SLC28A1-202ENST00000338602 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
SLC28A1-202ENST00000338602 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
SLC28A1-202ENST00000338602 MT1AP04731 61 aa3.44□□□□□ -1.86
SLC28A1-202ENST00000338602 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
SLC28A1-202ENST00000338602 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SLC28A1-202ENST00000338602 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
SLC28A1-202ENST00000338602 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
SLC28A1-202ENST00000338602 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
SLC28A1-202ENST00000338602 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SLC28A1-202ENST00000338602 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
SLC28A1-202ENST00000338602 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
SLC28A1-202ENST00000338602 MT3P25713 68 aa3.18□□□□□ -1.9
SLC28A1-202ENST00000338602 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.94
SLC28A1-202ENST00000338602 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
SLC28A1-202ENST00000338602 INE1O15225 51 aa2.76□□□□□ -1.97
SLC28A1-202ENST00000338602 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
SLC28A1-202ENST00000338602 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SLC28A1-202ENST00000338602 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
SLC28A1-202ENST00000338602 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SLC28A1-202ENST00000338602 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
SLC28A1-202ENST00000338602 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
SLC28A1-202ENST00000338602 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
SLC28A1-202ENST00000338602 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
SLC28A1-202ENST00000338602 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
SLC28A1-202ENST00000338602 PRM1P04553 51 aa2.24□□□□□ -2.05
SLC28A1-202ENST00000338602 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SLC28A1-202ENST00000338602 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
SLC28A1-202ENST00000338602 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SLC28A1-202ENST00000338602 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 91.4 ms