RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
CAPN3-202ENST00000337571 A8MU10 97 aa4.11□□□□□ -1.75
CAPN3-202ENST00000337571 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
CAPN3-202ENST00000337571 A0A1B0GU33 70 aa4.07□□□□□ -1.76
CAPN3-202ENST00000337571 SEC61GP60059 68 aa4.07□□□□□ -1.76
CAPN3-202ENST00000337571 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CAPN3-202ENST00000337571 SPATA8Q6RVD6 105 aa4.06□□□□□ -1.76
CAPN3-202ENST00000337571 A6NED7 52 aa4.03□□□□□ -1.76
CAPN3-202ENST00000337571 UQCR11O14957 56 aa4.02□□□□□ -1.77
CAPN3-202ENST00000337571 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CAPN3-202ENST00000337571 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
CAPN3-202ENST00000337571 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
CAPN3-202ENST00000337571 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
CAPN3-202ENST00000337571 A0A0D9SG42 100 aa3.99□□□□□ -1.77
CAPN3-202ENST00000337571 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CAPN3-202ENST00000337571 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
CAPN3-202ENST00000337571 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
CAPN3-202ENST00000337571 MT1EP04732 61 aa3.96□□□□□ -1.78
CAPN3-202ENST00000337571 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
CAPN3-202ENST00000337571 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
CAPN3-202ENST00000337571 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
CAPN3-202ENST00000337571 MT1GP13640 62 aa3.89□□□□□ -1.79
CAPN3-202ENST00000337571 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
CAPN3-202ENST00000337571 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
CAPN3-202ENST00000337571 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
CAPN3-202ENST00000337571 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
CAPN3-202ENST00000337571 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CAPN3-202ENST00000337571 TNP1P09430 55 aa3.78□□□□□ -1.8
CAPN3-202ENST00000337571 MT4P47944 62 aa3.78□□□□□ -1.8
CAPN3-202ENST00000337571 MT1MQ8N339 61 aa3.78□□□□□ -1.8
CAPN3-202ENST00000337571 MT1LQ93083 61 aa3.76□□□□□ -1.81
CAPN3-202ENST00000337571 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
CAPN3-202ENST00000337571 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
CAPN3-202ENST00000337571 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
CAPN3-202ENST00000337571 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CAPN3-202ENST00000337571 K7ERS5 55 aa3.71□□□□□ -1.82
CAPN3-202ENST00000337571 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CAPN3-202ENST00000337571 ROMO1P60602 79 aa3.67□□□□□ -1.82
CAPN3-202ENST00000337571 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
CAPN3-202ENST00000337571 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
CAPN3-202ENST00000337571 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
CAPN3-202ENST00000337571 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
CAPN3-202ENST00000337571 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
CAPN3-202ENST00000337571 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
CAPN3-202ENST00000337571 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
CAPN3-202ENST00000337571 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
CAPN3-202ENST00000337571 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
CAPN3-202ENST00000337571 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CAPN3-202ENST00000337571 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
CAPN3-202ENST00000337571 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CAPN3-202ENST00000337571 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
CAPN3-202ENST00000337571 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CAPN3-202ENST00000337571 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CAPN3-202ENST00000337571 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-202ENST00000337571 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
CAPN3-202ENST00000337571 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
CAPN3-202ENST00000337571 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
CAPN3-202ENST00000337571 MT1AP04731 61 aa3.21□□□□□ -1.9
CAPN3-202ENST00000337571 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CAPN3-202ENST00000337571 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CAPN3-202ENST00000337571 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
CAPN3-202ENST00000337571 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
CAPN3-202ENST00000337571 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CAPN3-202ENST00000337571 MUC5ACP98088 5654 aa3□□□□□ -1.93
CAPN3-202ENST00000337571 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CAPN3-202ENST00000337571 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
CAPN3-202ENST00000337571 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
CAPN3-202ENST00000337571 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
CAPN3-202ENST00000337571 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CAPN3-202ENST00000337571 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CAPN3-202ENST00000337571 INE1O15225 51 aa2.26□□□□□ -2.05
CAPN3-202ENST00000337571 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CAPN3-202ENST00000337571 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CAPN3-202ENST00000337571 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CAPN3-202ENST00000337571 PRM1P04553 51 aa1.94□□□□□ -2.1
CAPN3-202ENST00000337571 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CAPN3-202ENST00000337571 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 42.9 ms