RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
SEC13-201ENST00000337354 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
SEC13-201ENST00000337354 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
SEC13-201ENST00000337354 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
SEC13-201ENST00000337354 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
SEC13-201ENST00000337354 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
SEC13-201ENST00000337354 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
SEC13-201ENST00000337354 MT1GP13640 62 aa5.51□□□□□ -1.53
SEC13-201ENST00000337354 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
SEC13-201ENST00000337354 MT1LQ93083 61 aa5.49□□□□□ -1.53
SEC13-201ENST00000337354 PMAIP1Q13794 54 aa5.4□□□□□ -1.55
SEC13-201ENST00000337354 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
SEC13-201ENST00000337354 MT1MQ8N339 61 aa5.37□□□□□ -1.55
SEC13-201ENST00000337354 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SEC13-201ENST00000337354 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
SEC13-201ENST00000337354 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
SEC13-201ENST00000337354 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SEC13-201ENST00000337354 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
SEC13-201ENST00000337354 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
SEC13-201ENST00000337354 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
SEC13-201ENST00000337354 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
SEC13-201ENST00000337354 LCE4AQ5TA78 99 aa5□□□□□ -1.61
SEC13-201ENST00000337354 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
SEC13-201ENST00000337354 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
SEC13-201ENST00000337354 MT4P47944 62 aa4.97□□□□□ -1.61
SEC13-201ENST00000337354 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
SEC13-201ENST00000337354 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
SEC13-201ENST00000337354 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
SEC13-201ENST00000337354 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
SEC13-201ENST00000337354 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
SEC13-201ENST00000337354 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
SEC13-201ENST00000337354 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
SEC13-201ENST00000337354 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
SEC13-201ENST00000337354 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
SEC13-201ENST00000337354 MT1AP04731 61 aa4.69□□□□□ -1.66
SEC13-201ENST00000337354 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
SEC13-201ENST00000337354 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.66
SEC13-201ENST00000337354 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
SEC13-201ENST00000337354 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
SEC13-201ENST00000337354 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SEC13-201ENST00000337354 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
SEC13-201ENST00000337354 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
SEC13-201ENST00000337354 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
SEC13-201ENST00000337354 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SEC13-201ENST00000337354 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SEC13-201ENST00000337354 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
SEC13-201ENST00000337354 MT3P25713 68 aa4.3□□□□□ -1.72
SEC13-201ENST00000337354 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SEC13-201ENST00000337354 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
SEC13-201ENST00000337354 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
SEC13-201ENST00000337354 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SEC13-201ENST00000337354 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SEC13-201ENST00000337354 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
SEC13-201ENST00000337354 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
SEC13-201ENST00000337354 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SEC13-201ENST00000337354 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
SEC13-201ENST00000337354 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
SEC13-201ENST00000337354 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SEC13-201ENST00000337354 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SEC13-201ENST00000337354 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SEC13-201ENST00000337354 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
SEC13-201ENST00000337354 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
SEC13-201ENST00000337354 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
SEC13-201ENST00000337354 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
SEC13-201ENST00000337354 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SEC13-201ENST00000337354 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
SEC13-201ENST00000337354 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SEC13-201ENST00000337354 INE1O15225 51 aa3.14□□□□□ -1.91
SEC13-201ENST00000337354 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SEC13-201ENST00000337354 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SEC13-201ENST00000337354 H3BS24 57 aa2.97□□□□□ -1.93
SEC13-201ENST00000337354 PRM1P04553 51 aa2.92□□□□□ -1.94
SEC13-201ENST00000337354 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SEC13-201ENST00000337354 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SEC13-201ENST00000337354 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SEC13-201ENST00000337354 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SEC13-201ENST00000337354 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms