RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SPRR2AP35326 72 aa7.08□□□□□ -1.28
HLA-F-217ENST00000334668 UQCR11O14957 56 aa7.03□□□□□ -1.28
HLA-F-217ENST00000334668 Q1T7F1 81 aa7.02□□□□□ -1.29
HLA-F-217ENST00000334668 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
HLA-F-217ENST00000334668 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
HLA-F-217ENST00000334668 V9GYY9 64 aa6.98□□□□□ -1.29
HLA-F-217ENST00000334668 C10orf95Q9H7T3 257 aa6.93□□□□□ -1.3
HLA-F-217ENST00000334668 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
HLA-F-217ENST00000334668 LCE1EQ5T753 118 aa6.91□□□□□ -1.3
HLA-F-217ENST00000334668 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
HLA-F-217ENST00000334668 PSPHP1O15172 72 aa6.86□□□□□ -1.31
HLA-F-217ENST00000334668 SPRR2DP22532 72 aa6.84□□□□□ -1.31
HLA-F-217ENST00000334668 MT1EP04732 61 aa6.83□□□□□ -1.32
HLA-F-217ENST00000334668 TNP1P09430 55 aa6.83□□□□□ -1.32
HLA-F-217ENST00000334668 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
HLA-F-217ENST00000334668 MT3P25713 68 aa6.75□□□□□ -1.33
HLA-F-217ENST00000334668 KRTAP2-1Q9BYU5 128 aa6.73□□□□□ -1.33
HLA-F-217ENST00000334668 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
HLA-F-217ENST00000334668 KRTAP19-3Q7Z4W3 81 aa6.72□□□□□ -1.33
HLA-F-217ENST00000334668 K7ERS5 55 aa6.67□□□□□ -1.34
HLA-F-217ENST00000334668 A6NED7 52 aa6.63□□□□□ -1.35
HLA-F-217ENST00000334668 MT1GP13640 62 aa6.59□□□□□ -1.35
HLA-F-217ENST00000334668 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
HLA-F-217ENST00000334668 MT1LQ93083 61 aa6.57□□□□□ -1.36
HLA-F-217ENST00000334668 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
HLA-F-217ENST00000334668 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
HLA-F-217ENST00000334668 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
HLA-F-217ENST00000334668 MT1MQ8N339 61 aa6.48□□□□□ -1.37
HLA-F-217ENST00000334668 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
HLA-F-217ENST00000334668 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
HLA-F-217ENST00000334668 GPR98Q8WXG9 6306 aa6.3□□□□□ -1.4
HLA-F-217ENST00000334668 ROMO1P60602 79 aa6.3□□□□□ -1.4
HLA-F-217ENST00000334668 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
HLA-F-217ENST00000334668 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
HLA-F-217ENST00000334668 KRTAP5-1Q6L8H4 278 aa6.2□□□□□ -1.42
HLA-F-217ENST00000334668 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
HLA-F-217ENST00000334668 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
HLA-F-217ENST00000334668 LCE1FQ5T754 118 aa6.1□□□□□ -1.43
HLA-F-217ENST00000334668 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
HLA-F-217ENST00000334668 PMAIP1Q13794 54 aa6.07□□□□□ -1.44
HLA-F-217ENST00000334668 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
HLA-F-217ENST00000334668 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
HLA-F-217ENST00000334668 MT4P47944 62 aa5.95□□□□□ -1.46
HLA-F-217ENST00000334668 KRTAP4-4Q9BYR3 166 aa5.95□□□□□ -1.46
HLA-F-217ENST00000334668 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
HLA-F-217ENST00000334668 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
HLA-F-217ENST00000334668 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
HLA-F-217ENST00000334668 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
HLA-F-217ENST00000334668 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
HLA-F-217ENST00000334668 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
HLA-F-217ENST00000334668 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
HLA-F-217ENST00000334668 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
HLA-F-217ENST00000334668 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
HLA-F-217ENST00000334668 MT1AP04731 61 aa5.59□□□□□ -1.51
HLA-F-217ENST00000334668 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
HLA-F-217ENST00000334668 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
HLA-F-217ENST00000334668 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
HLA-F-217ENST00000334668 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
HLA-F-217ENST00000334668 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
HLA-F-217ENST00000334668 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
HLA-F-217ENST00000334668 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
HLA-F-217ENST00000334668 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
HLA-F-217ENST00000334668 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
HLA-F-217ENST00000334668 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
HLA-F-217ENST00000334668 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
HLA-F-217ENST00000334668 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
HLA-F-217ENST00000334668 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
HLA-F-217ENST00000334668 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
HLA-F-217ENST00000334668 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
HLA-F-217ENST00000334668 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
HLA-F-217ENST00000334668 INE1O15225 51 aa3.7□□□□□ -1.82
HLA-F-217ENST00000334668 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
HLA-F-217ENST00000334668 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
HLA-F-217ENST00000334668 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
HLA-F-217ENST00000334668 PRM1P04553 51 aa3.22□□□□□ -1.89
HLA-F-217ENST00000334668 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
HLA-F-217ENST00000334668 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms