RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
SMTN-201ENST00000333137 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
SMTN-201ENST00000333137 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
SMTN-201ENST00000333137 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
SMTN-201ENST00000333137 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
SMTN-201ENST00000333137 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
SMTN-201ENST00000333137 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
SMTN-201ENST00000333137 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
SMTN-201ENST00000333137 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
SMTN-201ENST00000333137 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
SMTN-201ENST00000333137 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
SMTN-201ENST00000333137 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
SMTN-201ENST00000333137 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SMTN-201ENST00000333137 PRM1P04553 51 aa4.27□□□□□ -1.73
SMTN-201ENST00000333137 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
SMTN-201ENST00000333137 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
SMTN-201ENST00000333137 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
SMTN-201ENST00000333137 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
SMTN-201ENST00000333137 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
SMTN-201ENST00000333137 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
SMTN-201ENST00000333137 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
SMTN-201ENST00000333137 MT1GP13640 62 aa4.12□□□□□ -1.75
SMTN-201ENST00000333137 MT1EP04732 61 aa4.07□□□□□ -1.76
SMTN-201ENST00000333137 MT1LQ93083 61 aa4.06□□□□□ -1.76
SMTN-201ENST00000333137 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SMTN-201ENST00000333137 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
SMTN-201ENST00000333137 SPRR2EP22531 72 aa4.03□□□□□ -1.76
SMTN-201ENST00000333137 SPRR2BP35325 72 aa4.03□□□□□ -1.76
SMTN-201ENST00000333137 SPRR2AP35326 72 aa4.03□□□□□ -1.76
SMTN-201ENST00000333137 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SMTN-201ENST00000333137 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
SMTN-201ENST00000333137 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
SMTN-201ENST00000333137 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
SMTN-201ENST00000333137 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
SMTN-201ENST00000333137 MT1MQ8N339 61 aa3.86□□□□□ -1.79
SMTN-201ENST00000333137 SPRR2DP22532 72 aa3.85□□□□□ -1.79
SMTN-201ENST00000333137 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
SMTN-201ENST00000333137 NEBP20929 6669 aa3.82□□□□□ -1.8
SMTN-201ENST00000333137 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
SMTN-201ENST00000333137 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
SMTN-201ENST00000333137 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
SMTN-201ENST00000333137 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
SMTN-201ENST00000333137 MT1AP04731 61 aa3.71□□□□□ -1.82
SMTN-201ENST00000333137 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SMTN-201ENST00000333137 MT4P47944 62 aa3.54□□□□□ -1.84
SMTN-201ENST00000333137 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
SMTN-201ENST00000333137 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
SMTN-201ENST00000333137 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
SMTN-201ENST00000333137 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SMTN-201ENST00000333137 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
SMTN-201ENST00000333137 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SMTN-201ENST00000333137 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
SMTN-201ENST00000333137 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
SMTN-201ENST00000333137 MT3P25713 68 aa3.1□□□□□ -1.91
SMTN-201ENST00000333137 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.94
SMTN-201ENST00000333137 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
SMTN-201ENST00000333137 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
SMTN-201ENST00000333137 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SMTN-201ENST00000333137 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
SMTN-201ENST00000333137 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
SMTN-201ENST00000333137 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
SMTN-201ENST00000333137 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
SMTN-201ENST00000333137 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SMTN-201ENST00000333137 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
SMTN-201ENST00000333137 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SMTN-201ENST00000333137 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SMTN-201ENST00000333137 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
SMTN-201ENST00000333137 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
SMTN-201ENST00000333137 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SMTN-201ENST00000333137 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
SMTN-201ENST00000333137 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.04
SMTN-201ENST00000333137 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SMTN-201ENST00000333137 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
SMTN-201ENST00000333137 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SMTN-201ENST00000333137 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
SMTN-201ENST00000333137 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SMTN-201ENST00000333137 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms