RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 ROMO1P60602 79 aa6.99□□□□□ -1.29
RAB28-202ENST00000330852 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
RAB28-202ENST00000330852 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
RAB28-202ENST00000330852 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
RAB28-202ENST00000330852 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
RAB28-202ENST00000330852 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
RAB28-202ENST00000330852 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
RAB28-202ENST00000330852 MT1EP04732 61 aa6.75□□□□□ -1.33
RAB28-202ENST00000330852 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
RAB28-202ENST00000330852 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
RAB28-202ENST00000330852 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
RAB28-202ENST00000330852 MT1GP13640 62 aa6.61□□□□□ -1.35
RAB28-202ENST00000330852 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
RAB28-202ENST00000330852 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
RAB28-202ENST00000330852 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
RAB28-202ENST00000330852 KRTAP4-12Q9BQ66 201 aa6.46□□□□□ -1.38
RAB28-202ENST00000330852 MT1MQ8N339 61 aa6.44□□□□□ -1.38
RAB28-202ENST00000330852 MT1LQ93083 61 aa6.43□□□□□ -1.38
RAB28-202ENST00000330852 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
RAB28-202ENST00000330852 TNP1P09430 55 aa6.42□□□□□ -1.38
RAB28-202ENST00000330852 KRTAP9-9Q9BYP9 154 aa6.42□□□□□ -1.38
RAB28-202ENST00000330852 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
RAB28-202ENST00000330852 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
RAB28-202ENST00000330852 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
RAB28-202ENST00000330852 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
RAB28-202ENST00000330852 MT4P47944 62 aa6.28□□□□□ -1.4
RAB28-202ENST00000330852 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
RAB28-202ENST00000330852 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
RAB28-202ENST00000330852 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
RAB28-202ENST00000330852 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
RAB28-202ENST00000330852 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
RAB28-202ENST00000330852 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
RAB28-202ENST00000330852 H3BS24 57 aa6.13□□□□□ -1.43
RAB28-202ENST00000330852 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
RAB28-202ENST00000330852 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
RAB28-202ENST00000330852 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
RAB28-202ENST00000330852 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
RAB28-202ENST00000330852 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
RAB28-202ENST00000330852 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
RAB28-202ENST00000330852 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
RAB28-202ENST00000330852 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
RAB28-202ENST00000330852 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
RAB28-202ENST00000330852 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
RAB28-202ENST00000330852 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
RAB28-202ENST00000330852 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
RAB28-202ENST00000330852 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
RAB28-202ENST00000330852 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
RAB28-202ENST00000330852 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
RAB28-202ENST00000330852 MT1AP04731 61 aa5.49□□□□□ -1.53
RAB28-202ENST00000330852 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
RAB28-202ENST00000330852 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
RAB28-202ENST00000330852 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
RAB28-202ENST00000330852 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
RAB28-202ENST00000330852 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
RAB28-202ENST00000330852 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
RAB28-202ENST00000330852 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
RAB28-202ENST00000330852 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
RAB28-202ENST00000330852 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
RAB28-202ENST00000330852 MT3P25713 68 aa5.05□□□□□ -1.6
RAB28-202ENST00000330852 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
RAB28-202ENST00000330852 INE1O15225 51 aa4.97□□□□□ -1.61
RAB28-202ENST00000330852 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
RAB28-202ENST00000330852 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
RAB28-202ENST00000330852 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
RAB28-202ENST00000330852 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
RAB28-202ENST00000330852 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
RAB28-202ENST00000330852 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
RAB28-202ENST00000330852 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
RAB28-202ENST00000330852 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
RAB28-202ENST00000330852 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
RAB28-202ENST00000330852 PRM1P04553 51 aa3.71□□□□□ -1.82
RAB28-202ENST00000330852 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
RAB28-202ENST00000330852 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
RAB28-202ENST00000330852 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
RAB28-202ENST00000330852 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
RAB28-202ENST00000330852 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
RAB28-202ENST00000330852 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 82 ms