RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
MRPL54-201ENST00000330133 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
MRPL54-201ENST00000330133 MT1GP13640 62 aa6.8□□□□□ -1.32
MRPL54-201ENST00000330133 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
MRPL54-201ENST00000330133 MT1LQ93083 61 aa6.76□□□□□ -1.33
MRPL54-201ENST00000330133 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
MRPL54-201ENST00000330133 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
MRPL54-201ENST00000330133 MT1MQ8N339 61 aa6.67□□□□□ -1.34
MRPL54-201ENST00000330133 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
MRPL54-201ENST00000330133 ROMO1P60602 79 aa6.61□□□□□ -1.35
MRPL54-201ENST00000330133 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
MRPL54-201ENST00000330133 KRTAP4-3Q9BYR4 195 aa6.49□□□□□ -1.37
MRPL54-201ENST00000330133 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
MRPL54-201ENST00000330133 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
MRPL54-201ENST00000330133 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
MRPL54-201ENST00000330133 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
MRPL54-201ENST00000330133 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
MRPL54-201ENST00000330133 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
MRPL54-201ENST00000330133 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
MRPL54-201ENST00000330133 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
MRPL54-201ENST00000330133 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
MRPL54-201ENST00000330133 MT4P47944 62 aa6.18□□□□□ -1.42
MRPL54-201ENST00000330133 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
MRPL54-201ENST00000330133 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
MRPL54-201ENST00000330133 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
MRPL54-201ENST00000330133 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
MRPL54-201ENST00000330133 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
MRPL54-201ENST00000330133 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
MRPL54-201ENST00000330133 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
MRPL54-201ENST00000330133 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
MRPL54-201ENST00000330133 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
MRPL54-201ENST00000330133 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
MRPL54-201ENST00000330133 MT1AP04731 61 aa5.77□□□□□ -1.49
MRPL54-201ENST00000330133 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
MRPL54-201ENST00000330133 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
MRPL54-201ENST00000330133 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
MRPL54-201ENST00000330133 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
MRPL54-201ENST00000330133 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
MRPL54-201ENST00000330133 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
MRPL54-201ENST00000330133 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
MRPL54-201ENST00000330133 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
MRPL54-201ENST00000330133 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
MRPL54-201ENST00000330133 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
MRPL54-201ENST00000330133 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
MRPL54-201ENST00000330133 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
MRPL54-201ENST00000330133 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
MRPL54-201ENST00000330133 MT3P25713 68 aa5.29□□□□□ -1.56
MRPL54-201ENST00000330133 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
MRPL54-201ENST00000330133 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
MRPL54-201ENST00000330133 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
MRPL54-201ENST00000330133 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
MRPL54-201ENST00000330133 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
MRPL54-201ENST00000330133 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
MRPL54-201ENST00000330133 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
MRPL54-201ENST00000330133 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
MRPL54-201ENST00000330133 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
MRPL54-201ENST00000330133 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
MRPL54-201ENST00000330133 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
MRPL54-201ENST00000330133 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
MRPL54-201ENST00000330133 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
MRPL54-201ENST00000330133 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
MRPL54-201ENST00000330133 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
MRPL54-201ENST00000330133 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
MRPL54-201ENST00000330133 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
MRPL54-201ENST00000330133 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
MRPL54-201ENST00000330133 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
MRPL54-201ENST00000330133 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
MRPL54-201ENST00000330133 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
MRPL54-201ENST00000330133 H3BS24 57 aa3.7□□□□□ -1.82
MRPL54-201ENST00000330133 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
MRPL54-201ENST00000330133 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
MRPL54-201ENST00000330133 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
MRPL54-201ENST00000330133 PRM1P04553 51 aa3.39□□□□□ -1.87
MRPL54-201ENST00000330133 INE1O15225 51 aa3.3□□□□□ -1.88
MRPL54-201ENST00000330133 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
MRPL54-201ENST00000330133 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
MRPL54-201ENST00000330133 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 128.2 ms