RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 KMT2DO14686 5537 aa5.54□□□□□ -1.52
TPM3-205ENST00000328159 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
TPM3-205ENST00000328159 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
TPM3-205ENST00000328159 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
TPM3-205ENST00000328159 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
TPM3-205ENST00000328159 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
TPM3-205ENST00000328159 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
TPM3-205ENST00000328159 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
TPM3-205ENST00000328159 MT1EP04732 61 aa5.37□□□□□ -1.55
TPM3-205ENST00000328159 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.56
TPM3-205ENST00000328159 MT1LQ93083 61 aa5.29□□□□□ -1.56
TPM3-205ENST00000328159 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
TPM3-205ENST00000328159 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
TPM3-205ENST00000328159 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
TPM3-205ENST00000328159 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
TPM3-205ENST00000328159 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.59
TPM3-205ENST00000328159 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
TPM3-205ENST00000328159 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
TPM3-205ENST00000328159 MT1GP13640 62 aa5.08□□□□□ -1.6
TPM3-205ENST00000328159 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
TPM3-205ENST00000328159 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
TPM3-205ENST00000328159 MT1MQ8N339 61 aa5.05□□□□□ -1.6
TPM3-205ENST00000328159 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
TPM3-205ENST00000328159 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
TPM3-205ENST00000328159 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
TPM3-205ENST00000328159 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
TPM3-205ENST00000328159 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
TPM3-205ENST00000328159 SPRR2EP22531 72 aa4.82□□□□□ -1.64
TPM3-205ENST00000328159 SPRR2BP35325 72 aa4.82□□□□□ -1.64
TPM3-205ENST00000328159 SPRR2AP35326 72 aa4.82□□□□□ -1.64
TPM3-205ENST00000328159 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
TPM3-205ENST00000328159 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
TPM3-205ENST00000328159 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
TPM3-205ENST00000328159 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
TPM3-205ENST00000328159 SPRR2DP22532 72 aa4.64□□□□□ -1.67
TPM3-205ENST00000328159 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
TPM3-205ENST00000328159 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
TPM3-205ENST00000328159 NEBP20929 6669 aa4.51□□□□□ -1.69
TPM3-205ENST00000328159 INE1O15225 51 aa4.49□□□□□ -1.69
TPM3-205ENST00000328159 MT1AP04731 61 aa4.49□□□□□ -1.69
TPM3-205ENST00000328159 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
TPM3-205ENST00000328159 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
TPM3-205ENST00000328159 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
TPM3-205ENST00000328159 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
TPM3-205ENST00000328159 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
TPM3-205ENST00000328159 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
TPM3-205ENST00000328159 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
TPM3-205ENST00000328159 MT3P25713 68 aa4.05□□□□□ -1.76
TPM3-205ENST00000328159 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
TPM3-205ENST00000328159 MT4P47944 62 aa4.03□□□□□ -1.76
TPM3-205ENST00000328159 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TPM3-205ENST00000328159 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
TPM3-205ENST00000328159 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
TPM3-205ENST00000328159 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
TPM3-205ENST00000328159 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
TPM3-205ENST00000328159 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
TPM3-205ENST00000328159 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
TPM3-205ENST00000328159 PRM1P04553 51 aa3.53□□□□□ -1.84
TPM3-205ENST00000328159 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
TPM3-205ENST00000328159 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TPM3-205ENST00000328159 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
TPM3-205ENST00000328159 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
TPM3-205ENST00000328159 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
TPM3-205ENST00000328159 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
TPM3-205ENST00000328159 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.89
TPM3-205ENST00000328159 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
TPM3-205ENST00000328159 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
TPM3-205ENST00000328159 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
TPM3-205ENST00000328159 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
TPM3-205ENST00000328159 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
TPM3-205ENST00000328159 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
TPM3-205ENST00000328159 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.97
TPM3-205ENST00000328159 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TPM3-205ENST00000328159 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
TPM3-205ENST00000328159 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
TPM3-205ENST00000328159 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TPM3-205ENST00000328159 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 171.1 ms