RNA–Protein interactions for RNA: ENST00000327307.11

RRN3-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 2 BASIC

Gene RRN3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-202ENST00000327307 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
RRN3-202ENST00000327307 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
RRN3-202ENST00000327307 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
RRN3-202ENST00000327307 FLGP20930 4061 aaPredicted RBP2.49□□□□□ -2.01
RRN3-202ENST00000327307 M0R2T5 61 aa2.49□□□□□ -2.01
RRN3-202ENST00000327307 C9orf92A6NGG3 77 aa2.48□□□□□ -2.01
RRN3-202ENST00000327307 USH2AO75445 5202 aa2.45□□□□□ -2.02
RRN3-202ENST00000327307 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
RRN3-202ENST00000327307 TNP1P09430 55 aa2.42□□□□□ -2.02
RRN3-202ENST00000327307 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
RRN3-202ENST00000327307 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
RRN3-202ENST00000327307 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
RRN3-202ENST00000327307 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
RRN3-202ENST00000327307 MT2AP02795 61 aa2.34□□□□□ -2.04
RRN3-202ENST00000327307 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
RRN3-202ENST00000327307 MT1FP04733 61 aa2.32□□□□□ -2.04
RRN3-202ENST00000327307 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
RRN3-202ENST00000327307 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
RRN3-202ENST00000327307 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
RRN3-202ENST00000327307 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
RRN3-202ENST00000327307 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
RRN3-202ENST00000327307 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
RRN3-202ENST00000327307 NEBP20929 6669 aa2.2□□□□□ -2.06
RRN3-202ENST00000327307 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
RRN3-202ENST00000327307 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
RRN3-202ENST00000327307 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
RRN3-202ENST00000327307 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
RRN3-202ENST00000327307 KMT2DO14686 5537 aa2.13□□□□□ -2.07
RRN3-202ENST00000327307 MT1BP07438 61 aa2.09□□□□□ -2.07
RRN3-202ENST00000327307 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
RRN3-202ENST00000327307 KRTAP19-8Q3LI54 63 aa2.08□□□□□ -2.08
RRN3-202ENST00000327307 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
RRN3-202ENST00000327307 PRM1P04553 51 aa2.01□□□□□ -2.09
RRN3-202ENST00000327307 SPRR2EP22531 72 aa2□□□□□ -2.09
RRN3-202ENST00000327307 SPRR2BP35325 72 aa2□□□□□ -2.09
RRN3-202ENST00000327307 SPRR2AP35326 72 aa2□□□□□ -2.09
RRN3-202ENST00000327307 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
RRN3-202ENST00000327307 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
RRN3-202ENST00000327307 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
RRN3-202ENST00000327307 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
RRN3-202ENST00000327307 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
RRN3-202ENST00000327307 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
RRN3-202ENST00000327307 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
RRN3-202ENST00000327307 SPRR2DP22532 72 aa1.94□□□□□ -2.1
RRN3-202ENST00000327307 MT1XP80297 61 aa1.93□□□□□ -2.1
RRN3-202ENST00000327307 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
RRN3-202ENST00000327307 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
RRN3-202ENST00000327307 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
RRN3-202ENST00000327307 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
RRN3-202ENST00000327307 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
RRN3-202ENST00000327307 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
RRN3-202ENST00000327307 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
RRN3-202ENST00000327307 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
RRN3-202ENST00000327307 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
RRN3-202ENST00000327307 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
RRN3-202ENST00000327307 MT1EP04732 61 aa1.73□□□□□ -2.13
RRN3-202ENST00000327307 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
RRN3-202ENST00000327307 MT1AP04731 61 aa1.69□□□□□ -2.14
RRN3-202ENST00000327307 MT1GP13640 62 aa1.69□□□□□ -2.14
RRN3-202ENST00000327307 MT4P47944 62 aa1.69□□□□□ -2.14
RRN3-202ENST00000327307 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
RRN3-202ENST00000327307 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
RRN3-202ENST00000327307 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
RRN3-202ENST00000327307 MT1MQ8N339 61 aa1.64□□□□□ -2.15
RRN3-202ENST00000327307 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
RRN3-202ENST00000327307 MT1LQ93083 61 aa1.62□□□□□ -2.15
RRN3-202ENST00000327307 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
RRN3-202ENST00000327307 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
RRN3-202ENST00000327307 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
RRN3-202ENST00000327307 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
RRN3-202ENST00000327307 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
RRN3-202ENST00000327307 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
RRN3-202ENST00000327307 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
RRN3-202ENST00000327307 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
RRN3-202ENST00000327307 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
RRN3-202ENST00000327307 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
RRN3-202ENST00000327307 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 55.6 ms