RNA–Protein interactions for RNA: ENST00000326407.10

ITM2C-201, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-201ENST00000326407 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
ITM2C-201ENST00000326407 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
ITM2C-201ENST00000326407 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
ITM2C-201ENST00000326407 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
ITM2C-201ENST00000326407 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
ITM2C-201ENST00000326407 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
ITM2C-201ENST00000326407 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
ITM2C-201ENST00000326407 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
ITM2C-201ENST00000326407 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
ITM2C-201ENST00000326407 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
ITM2C-201ENST00000326407 INE1O15225 51 aa5.83□□□□□ -1.48
ITM2C-201ENST00000326407 MT1EP04732 61 aa5.83□□□□□ -1.48
ITM2C-201ENST00000326407 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
ITM2C-201ENST00000326407 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
ITM2C-201ENST00000326407 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
ITM2C-201ENST00000326407 SPRR2EP22531 72 aa5.79□□□□□ -1.48
ITM2C-201ENST00000326407 SPRR2BP35325 72 aa5.79□□□□□ -1.48
ITM2C-201ENST00000326407 SPRR2AP35326 72 aa5.79□□□□□ -1.48
ITM2C-201ENST00000326407 MT1LQ93083 61 aa5.79□□□□□ -1.48
ITM2C-201ENST00000326407 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
ITM2C-201ENST00000326407 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
ITM2C-201ENST00000326407 SPRR2DP22532 72 aa5.62□□□□□ -1.51
ITM2C-201ENST00000326407 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
ITM2C-201ENST00000326407 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
ITM2C-201ENST00000326407 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
ITM2C-201ENST00000326407 MT1GP13640 62 aa5.49□□□□□ -1.53
ITM2C-201ENST00000326407 MT1MQ8N339 61 aa5.47□□□□□ -1.53
ITM2C-201ENST00000326407 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
ITM2C-201ENST00000326407 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
ITM2C-201ENST00000326407 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
ITM2C-201ENST00000326407 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
ITM2C-201ENST00000326407 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
ITM2C-201ENST00000326407 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
ITM2C-201ENST00000326407 LCE1DQ5T752 114 aa5□□□□□ -1.61
ITM2C-201ENST00000326407 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
ITM2C-201ENST00000326407 MT1AP04731 61 aa4.9□□□□□ -1.63
ITM2C-201ENST00000326407 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
ITM2C-201ENST00000326407 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
ITM2C-201ENST00000326407 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
ITM2C-201ENST00000326407 MT4P47944 62 aa4.85□□□□□ -1.63
ITM2C-201ENST00000326407 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
ITM2C-201ENST00000326407 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
ITM2C-201ENST00000326407 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
ITM2C-201ENST00000326407 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
ITM2C-201ENST00000326407 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
ITM2C-201ENST00000326407 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
ITM2C-201ENST00000326407 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
ITM2C-201ENST00000326407 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.66
ITM2C-201ENST00000326407 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
ITM2C-201ENST00000326407 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
ITM2C-201ENST00000326407 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
ITM2C-201ENST00000326407 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
ITM2C-201ENST00000326407 MT3P25713 68 aa4.42□□□□□ -1.7
ITM2C-201ENST00000326407 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
ITM2C-201ENST00000326407 PRM1P04553 51 aa4.32□□□□□ -1.72
ITM2C-201ENST00000326407 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
ITM2C-201ENST00000326407 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
ITM2C-201ENST00000326407 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
ITM2C-201ENST00000326407 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
ITM2C-201ENST00000326407 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
ITM2C-201ENST00000326407 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
ITM2C-201ENST00000326407 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
ITM2C-201ENST00000326407 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
ITM2C-201ENST00000326407 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.8
ITM2C-201ENST00000326407 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
ITM2C-201ENST00000326407 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
ITM2C-201ENST00000326407 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
ITM2C-201ENST00000326407 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
ITM2C-201ENST00000326407 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
ITM2C-201ENST00000326407 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
ITM2C-201ENST00000326407 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
ITM2C-201ENST00000326407 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
ITM2C-201ENST00000326407 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
ITM2C-201ENST00000326407 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
ITM2C-201ENST00000326407 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
ITM2C-201ENST00000326407 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
ITM2C-201ENST00000326407 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms