RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 V9GYY9 64 aa5.83□□□□□ -1.48
TSFM-201ENST00000323833 Q1T7F1 81 aa5.82□□□□□ -1.48
TSFM-201ENST00000323833 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
TSFM-201ENST00000323833 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
TSFM-201ENST00000323833 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
TSFM-201ENST00000323833 SPRR2DP22532 72 aa5.8□□□□□ -1.48
TSFM-201ENST00000323833 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
TSFM-201ENST00000323833 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
TSFM-201ENST00000323833 TNP1P09430 55 aa5.75□□□□□ -1.49
TSFM-201ENST00000323833 MT1EP04732 61 aa5.73□□□□□ -1.49
TSFM-201ENST00000323833 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
TSFM-201ENST00000323833 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
TSFM-201ENST00000323833 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
TSFM-201ENST00000323833 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
TSFM-201ENST00000323833 K7ERS5 55 aa5.63□□□□□ -1.51
TSFM-201ENST00000323833 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
TSFM-201ENST00000323833 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
TSFM-201ENST00000323833 A6NED7 52 aa5.62□□□□□ -1.51
TSFM-201ENST00000323833 MT1GP13640 62 aa5.52□□□□□ -1.53
TSFM-201ENST00000323833 MT1LQ93083 61 aa5.52□□□□□ -1.53
TSFM-201ENST00000323833 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
TSFM-201ENST00000323833 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
TSFM-201ENST00000323833 MT1MQ8N339 61 aa5.46□□□□□ -1.54
TSFM-201ENST00000323833 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
TSFM-201ENST00000323833 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
TSFM-201ENST00000323833 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
TSFM-201ENST00000323833 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
TSFM-201ENST00000323833 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
TSFM-201ENST00000323833 ROMO1P60602 79 aa5.31□□□□□ -1.56
TSFM-201ENST00000323833 MT4P47944 62 aa5.07□□□□□ -1.6
TSFM-201ENST00000323833 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
TSFM-201ENST00000323833 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
TSFM-201ENST00000323833 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
TSFM-201ENST00000323833 MT3P25713 68 aa5.03□□□□□ -1.6
TSFM-201ENST00000323833 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
TSFM-201ENST00000323833 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
TSFM-201ENST00000323833 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
TSFM-201ENST00000323833 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
TSFM-201ENST00000323833 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
TSFM-201ENST00000323833 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
TSFM-201ENST00000323833 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
TSFM-201ENST00000323833 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
TSFM-201ENST00000323833 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
TSFM-201ENST00000323833 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
TSFM-201ENST00000323833 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
TSFM-201ENST00000323833 MT1AP04731 61 aa4.69□□□□□ -1.66
TSFM-201ENST00000323833 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
TSFM-201ENST00000323833 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
TSFM-201ENST00000323833 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
TSFM-201ENST00000323833 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
TSFM-201ENST00000323833 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
TSFM-201ENST00000323833 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
TSFM-201ENST00000323833 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
TSFM-201ENST00000323833 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
TSFM-201ENST00000323833 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
TSFM-201ENST00000323833 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
TSFM-201ENST00000323833 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
TSFM-201ENST00000323833 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
TSFM-201ENST00000323833 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
TSFM-201ENST00000323833 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
TSFM-201ENST00000323833 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
TSFM-201ENST00000323833 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TSFM-201ENST00000323833 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
TSFM-201ENST00000323833 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
TSFM-201ENST00000323833 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
TSFM-201ENST00000323833 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
TSFM-201ENST00000323833 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
TSFM-201ENST00000323833 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
TSFM-201ENST00000323833 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
TSFM-201ENST00000323833 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
TSFM-201ENST00000323833 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TSFM-201ENST00000323833 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
TSFM-201ENST00000323833 INE1O15225 51 aa2.77□□□□□ -1.97
TSFM-201ENST00000323833 PRM1P04553 51 aa2.74□□□□□ -1.97
TSFM-201ENST00000323833 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
TSFM-201ENST00000323833 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
TSFM-201ENST00000323833 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 87.6 ms