RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
HIGD1A-201ENST00000321331 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
HIGD1A-201ENST00000321331 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
HIGD1A-201ENST00000321331 TNP1P09430 55 aa7.41□□□□□ -1.22
HIGD1A-201ENST00000321331 MT1EP04732 61 aa7.37□□□□□ -1.23
HIGD1A-201ENST00000321331 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
HIGD1A-201ENST00000321331 A6NED7 52 aa7.36□□□□□ -1.23
HIGD1A-201ENST00000321331 KRTAP4-2Q9BYR5 136 aa7.35□□□□□ -1.23
HIGD1A-201ENST00000321331 KRTAP2-2Q9BYT5 123 aa7.33□□□□□ -1.24
HIGD1A-201ENST00000321331 KRTAP2-1Q9BYU5 128 aa7.33□□□□□ -1.24
HIGD1A-201ENST00000321331 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
HIGD1A-201ENST00000321331 KRTAP19-3Q7Z4W3 81 aa7.28□□□□□ -1.24
HIGD1A-201ENST00000321331 K7ERS5 55 aa7.26□□□□□ -1.25
HIGD1A-201ENST00000321331 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
HIGD1A-201ENST00000321331 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
HIGD1A-201ENST00000321331 MT1GP13640 62 aa7.14□□□□□ -1.27
HIGD1A-201ENST00000321331 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
HIGD1A-201ENST00000321331 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
HIGD1A-201ENST00000321331 MT1LQ93083 61 aa7.08□□□□□ -1.28
HIGD1A-201ENST00000321331 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
HIGD1A-201ENST00000321331 MT1MQ8N339 61 aa7□□□□□ -1.29
HIGD1A-201ENST00000321331 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
HIGD1A-201ENST00000321331 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
HIGD1A-201ENST00000321331 ROMO1P60602 79 aa6.87□□□□□ -1.31
HIGD1A-201ENST00000321331 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
HIGD1A-201ENST00000321331 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
HIGD1A-201ENST00000321331 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
HIGD1A-201ENST00000321331 MT4P47944 62 aa6.54□□□□□ -1.36
HIGD1A-201ENST00000321331 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
HIGD1A-201ENST00000321331 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.37
HIGD1A-201ENST00000321331 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
HIGD1A-201ENST00000321331 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
HIGD1A-201ENST00000321331 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
HIGD1A-201ENST00000321331 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
HIGD1A-201ENST00000321331 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
HIGD1A-201ENST00000321331 GPR98Q8WXG9 6306 aa6.3□□□□□ -1.4
HIGD1A-201ENST00000321331 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
HIGD1A-201ENST00000321331 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
HIGD1A-201ENST00000321331 KRTAP20-2Q3LI61 65 aa6.18□□□□□ -1.42
HIGD1A-201ENST00000321331 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
HIGD1A-201ENST00000321331 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
HIGD1A-201ENST00000321331 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
HIGD1A-201ENST00000321331 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
HIGD1A-201ENST00000321331 MT1AP04731 61 aa6.04□□□□□ -1.44
HIGD1A-201ENST00000321331 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
HIGD1A-201ENST00000321331 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
HIGD1A-201ENST00000321331 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.45
HIGD1A-201ENST00000321331 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
HIGD1A-201ENST00000321331 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
HIGD1A-201ENST00000321331 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
HIGD1A-201ENST00000321331 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
HIGD1A-201ENST00000321331 MT3P25713 68 aa5.53□□□□□ -1.52
HIGD1A-201ENST00000321331 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
HIGD1A-201ENST00000321331 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
HIGD1A-201ENST00000321331 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
HIGD1A-201ENST00000321331 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
HIGD1A-201ENST00000321331 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
HIGD1A-201ENST00000321331 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
HIGD1A-201ENST00000321331 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
HIGD1A-201ENST00000321331 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
HIGD1A-201ENST00000321331 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
HIGD1A-201ENST00000321331 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
HIGD1A-201ENST00000321331 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
HIGD1A-201ENST00000321331 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
HIGD1A-201ENST00000321331 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
HIGD1A-201ENST00000321331 LCE1CQ5T751 118 aa4.65□□□□□ -1.66
HIGD1A-201ENST00000321331 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
HIGD1A-201ENST00000321331 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
HIGD1A-201ENST00000321331 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
HIGD1A-201ENST00000321331 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
HIGD1A-201ENST00000321331 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
HIGD1A-201ENST00000321331 INE1O15225 51 aa3.7□□□□□ -1.82
HIGD1A-201ENST00000321331 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
HIGD1A-201ENST00000321331 PRM1P04553 51 aa3.53□□□□□ -1.84
HIGD1A-201ENST00000321331 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
HIGD1A-201ENST00000321331 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
HIGD1A-201ENST00000321331 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 184.7 ms