RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 K7ERS5 55 aa6.03□□□□□ -1.44
LRRC42-201ENST00000319223 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
LRRC42-201ENST00000319223 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
LRRC42-201ENST00000319223 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
LRRC42-201ENST00000319223 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
LRRC42-201ENST00000319223 MT1LQ93083 61 aa5.93□□□□□ -1.46
LRRC42-201ENST00000319223 MT1GP13640 62 aa5.92□□□□□ -1.46
LRRC42-201ENST00000319223 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
LRRC42-201ENST00000319223 MT1MQ8N339 61 aa5.85□□□□□ -1.47
LRRC42-201ENST00000319223 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
LRRC42-201ENST00000319223 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
LRRC42-201ENST00000319223 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
LRRC42-201ENST00000319223 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
LRRC42-201ENST00000319223 ROMO1P60602 79 aa5.73□□□□□ -1.49
LRRC42-201ENST00000319223 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
LRRC42-201ENST00000319223 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
LRRC42-201ENST00000319223 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
LRRC42-201ENST00000319223 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
LRRC42-201ENST00000319223 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
LRRC42-201ENST00000319223 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
LRRC42-201ENST00000319223 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
LRRC42-201ENST00000319223 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
LRRC42-201ENST00000319223 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
LRRC42-201ENST00000319223 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
LRRC42-201ENST00000319223 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
LRRC42-201ENST00000319223 MT4P47944 62 aa5.41□□□□□ -1.54
LRRC42-201ENST00000319223 H3BS24 57 aa5.4□□□□□ -1.54
LRRC42-201ENST00000319223 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
LRRC42-201ENST00000319223 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
LRRC42-201ENST00000319223 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
LRRC42-201ENST00000319223 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
LRRC42-201ENST00000319223 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
LRRC42-201ENST00000319223 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
LRRC42-201ENST00000319223 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
LRRC42-201ENST00000319223 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
LRRC42-201ENST00000319223 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
LRRC42-201ENST00000319223 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
LRRC42-201ENST00000319223 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
LRRC42-201ENST00000319223 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
LRRC42-201ENST00000319223 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
LRRC42-201ENST00000319223 MT1AP04731 61 aa5.03□□□□□ -1.6
LRRC42-201ENST00000319223 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
LRRC42-201ENST00000319223 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
LRRC42-201ENST00000319223 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
LRRC42-201ENST00000319223 PRAC1Q96KF2 57 aa5□□□□□ -1.61
LRRC42-201ENST00000319223 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
LRRC42-201ENST00000319223 KRTAP5-10Q6L8G5 202 aa4.92□□□□□ -1.62
LRRC42-201ENST00000319223 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.62
LRRC42-201ENST00000319223 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
LRRC42-201ENST00000319223 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
LRRC42-201ENST00000319223 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
LRRC42-201ENST00000319223 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
LRRC42-201ENST00000319223 MT3P25713 68 aa4.58□□□□□ -1.68
LRRC42-201ENST00000319223 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
LRRC42-201ENST00000319223 KRTAP5-8O75690 187 aa4.46□□□□□ -1.69
LRRC42-201ENST00000319223 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
LRRC42-201ENST00000319223 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
LRRC42-201ENST00000319223 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
LRRC42-201ENST00000319223 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
LRRC42-201ENST00000319223 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
LRRC42-201ENST00000319223 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
LRRC42-201ENST00000319223 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
LRRC42-201ENST00000319223 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
LRRC42-201ENST00000319223 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
LRRC42-201ENST00000319223 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
LRRC42-201ENST00000319223 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
LRRC42-201ENST00000319223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
LRRC42-201ENST00000319223 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
LRRC42-201ENST00000319223 INE1O15225 51 aa3.38□□□□□ -1.87
LRRC42-201ENST00000319223 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
LRRC42-201ENST00000319223 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
LRRC42-201ENST00000319223 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
LRRC42-201ENST00000319223 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
LRRC42-201ENST00000319223 PRM1P04553 51 aa2.97□□□□□ -1.93
LRRC42-201ENST00000319223 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
LRRC42-201ENST00000319223 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
LRRC42-201ENST00000319223 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 113 ms