RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 MT1EP04732 61 aa5.81□□□□□ -1.48
FOXR1-201ENST00000317011 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
FOXR1-201ENST00000317011 TNP1P09430 55 aa5.71□□□□□ -1.5
FOXR1-201ENST00000317011 MT1GP13640 62 aa5.66□□□□□ -1.5
FOXR1-201ENST00000317011 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
FOXR1-201ENST00000317011 ROMO1P60602 79 aa5.64□□□□□ -1.51
FOXR1-201ENST00000317011 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
FOXR1-201ENST00000317011 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
FOXR1-201ENST00000317011 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
FOXR1-201ENST00000317011 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
FOXR1-201ENST00000317011 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
FOXR1-201ENST00000317011 MT1MQ8N339 61 aa5.53□□□□□ -1.52
FOXR1-201ENST00000317011 MT1LQ93083 61 aa5.53□□□□□ -1.52
FOXR1-201ENST00000317011 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
FOXR1-201ENST00000317011 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
FOXR1-201ENST00000317011 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
FOXR1-201ENST00000317011 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.54
FOXR1-201ENST00000317011 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
FOXR1-201ENST00000317011 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
FOXR1-201ENST00000317011 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
FOXR1-201ENST00000317011 MT4P47944 62 aa5.38□□□□□ -1.55
FOXR1-201ENST00000317011 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
FOXR1-201ENST00000317011 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
FOXR1-201ENST00000317011 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
FOXR1-201ENST00000317011 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
FOXR1-201ENST00000317011 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
FOXR1-201ENST00000317011 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
FOXR1-201ENST00000317011 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
FOXR1-201ENST00000317011 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
FOXR1-201ENST00000317011 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
FOXR1-201ENST00000317011 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
FOXR1-201ENST00000317011 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
FOXR1-201ENST00000317011 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
FOXR1-201ENST00000317011 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
FOXR1-201ENST00000317011 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
FOXR1-201ENST00000317011 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
FOXR1-201ENST00000317011 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
FOXR1-201ENST00000317011 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
FOXR1-201ENST00000317011 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
FOXR1-201ENST00000317011 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
FOXR1-201ENST00000317011 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
FOXR1-201ENST00000317011 MT1AP04731 61 aa4.7□□□□□ -1.66
FOXR1-201ENST00000317011 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
FOXR1-201ENST00000317011 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
FOXR1-201ENST00000317011 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
FOXR1-201ENST00000317011 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
FOXR1-201ENST00000317011 KRTAP5-8O75690 187 aa4.54□□□□□ -1.68
FOXR1-201ENST00000317011 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
FOXR1-201ENST00000317011 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
FOXR1-201ENST00000317011 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
FOXR1-201ENST00000317011 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
FOXR1-201ENST00000317011 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
FOXR1-201ENST00000317011 MT3P25713 68 aa4.31□□□□□ -1.72
FOXR1-201ENST00000317011 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
FOXR1-201ENST00000317011 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
FOXR1-201ENST00000317011 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
FOXR1-201ENST00000317011 H3BS24 57 aa4.1□□□□□ -1.75
FOXR1-201ENST00000317011 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
FOXR1-201ENST00000317011 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
FOXR1-201ENST00000317011 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
FOXR1-201ENST00000317011 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
FOXR1-201ENST00000317011 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
FOXR1-201ENST00000317011 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
FOXR1-201ENST00000317011 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
FOXR1-201ENST00000317011 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
FOXR1-201ENST00000317011 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
FOXR1-201ENST00000317011 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
FOXR1-201ENST00000317011 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
FOXR1-201ENST00000317011 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
FOXR1-201ENST00000317011 INE1O15225 51 aa3.24□□□□□ -1.89
FOXR1-201ENST00000317011 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
FOXR1-201ENST00000317011 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
FOXR1-201ENST00000317011 PRM1P04553 51 aa2.93□□□□□ -1.94
FOXR1-201ENST00000317011 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
FOXR1-201ENST00000317011 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
FOXR1-201ENST00000317011 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
FOXR1-201ENST00000317011 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 50.2 ms