RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
MMP1-201ENST00000315274 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
MMP1-201ENST00000315274 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
MMP1-201ENST00000315274 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
MMP1-201ENST00000315274 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
MMP1-201ENST00000315274 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
MMP1-201ENST00000315274 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
MMP1-201ENST00000315274 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
MMP1-201ENST00000315274 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
MMP1-201ENST00000315274 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
MMP1-201ENST00000315274 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
MMP1-201ENST00000315274 MT1EP04732 61 aa3.49□□□□□ -1.85
MMP1-201ENST00000315274 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
MMP1-201ENST00000315274 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
MMP1-201ENST00000315274 SPRR2EP22531 72 aa3.47□□□□□ -1.85
MMP1-201ENST00000315274 SPRR2BP35325 72 aa3.47□□□□□ -1.85
MMP1-201ENST00000315274 SPRR2AP35326 72 aa3.47□□□□□ -1.85
MMP1-201ENST00000315274 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
MMP1-201ENST00000315274 NEBP20929 6669 aa3.46□□□□□ -1.86
MMP1-201ENST00000315274 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
MMP1-201ENST00000315274 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
MMP1-201ENST00000315274 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
MMP1-201ENST00000315274 MT1LQ93083 61 aa3.4□□□□□ -1.87
MMP1-201ENST00000315274 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
MMP1-201ENST00000315274 MT1GP13640 62 aa3.36□□□□□ -1.87
MMP1-201ENST00000315274 SPRR2DP22532 72 aa3.35□□□□□ -1.87
MMP1-201ENST00000315274 MT1MQ8N339 61 aa3.31□□□□□ -1.88
MMP1-201ENST00000315274 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
MMP1-201ENST00000315274 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
MMP1-201ENST00000315274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
MMP1-201ENST00000315274 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
MMP1-201ENST00000315274 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
MMP1-201ENST00000315274 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
MMP1-201ENST00000315274 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
MMP1-201ENST00000315274 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
MMP1-201ENST00000315274 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
MMP1-201ENST00000315274 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
MMP1-201ENST00000315274 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
MMP1-201ENST00000315274 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
MMP1-201ENST00000315274 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
MMP1-201ENST00000315274 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
MMP1-201ENST00000315274 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
MMP1-201ENST00000315274 MT4P47944 62 aa2.93□□□□□ -1.94
MMP1-201ENST00000315274 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
MMP1-201ENST00000315274 MT1AP04731 61 aa2.89□□□□□ -1.95
MMP1-201ENST00000315274 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
MMP1-201ENST00000315274 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
MMP1-201ENST00000315274 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
MMP1-201ENST00000315274 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
MMP1-201ENST00000315274 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.97
MMP1-201ENST00000315274 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.97
MMP1-201ENST00000315274 INE1O15225 51 aa2.75□□□□□ -1.97
MMP1-201ENST00000315274 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
MMP1-201ENST00000315274 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
MMP1-201ENST00000315274 MT3P25713 68 aa2.64□□□□□ -1.99
MMP1-201ENST00000315274 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
MMP1-201ENST00000315274 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
MMP1-201ENST00000315274 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
MMP1-201ENST00000315274 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
MMP1-201ENST00000315274 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
MMP1-201ENST00000315274 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
MMP1-201ENST00000315274 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
MMP1-201ENST00000315274 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
MMP1-201ENST00000315274 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
MMP1-201ENST00000315274 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
MMP1-201ENST00000315274 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
MMP1-201ENST00000315274 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
MMP1-201ENST00000315274 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
MMP1-201ENST00000315274 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
MMP1-201ENST00000315274 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
MMP1-201ENST00000315274 PRM1P04553 51 aa1.93□□□□□ -2.1
MMP1-201ENST00000315274 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
MMP1-201ENST00000315274 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
MMP1-201ENST00000315274 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
MMP1-201ENST00000315274 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
MMP1-201ENST00000315274 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
MMP1-201ENST00000315274 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 96.3 ms