RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
CHRNA9-201ENST00000310169 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
CHRNA9-201ENST00000310169 INE1O15225 51 aa4.09□□□□□ -1.75
CHRNA9-201ENST00000310169 MT1XP80297 61 aa4.05□□□□□ -1.76
CHRNA9-201ENST00000310169 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
CHRNA9-201ENST00000310169 KMT2DO14686 5537 aa3.97□□□□□ -1.77
CHRNA9-201ENST00000310169 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
CHRNA9-201ENST00000310169 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
CHRNA9-201ENST00000310169 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
CHRNA9-201ENST00000310169 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
CHRNA9-201ENST00000310169 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
CHRNA9-201ENST00000310169 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
CHRNA9-201ENST00000310169 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
CHRNA9-201ENST00000310169 NEBP20929 6669 aa3.79□□□□□ -1.8
CHRNA9-201ENST00000310169 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
CHRNA9-201ENST00000310169 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
CHRNA9-201ENST00000310169 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CHRNA9-201ENST00000310169 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CHRNA9-201ENST00000310169 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CHRNA9-201ENST00000310169 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
CHRNA9-201ENST00000310169 KRTAP12-3P60328 96 aa3.65□□□□□ -1.82
CHRNA9-201ENST00000310169 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
CHRNA9-201ENST00000310169 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
CHRNA9-201ENST00000310169 SPRR2DP22532 72 aa3.6□□□□□ -1.83
CHRNA9-201ENST00000310169 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
CHRNA9-201ENST00000310169 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.84
CHRNA9-201ENST00000310169 MT1EP04732 61 aa3.58□□□□□ -1.84
CHRNA9-201ENST00000310169 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
CHRNA9-201ENST00000310169 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
CHRNA9-201ENST00000310169 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
CHRNA9-201ENST00000310169 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CHRNA9-201ENST00000310169 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
CHRNA9-201ENST00000310169 MT1GP13640 62 aa3.47□□□□□ -1.85
CHRNA9-201ENST00000310169 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
CHRNA9-201ENST00000310169 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
CHRNA9-201ENST00000310169 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
CHRNA9-201ENST00000310169 MT1LQ93083 61 aa3.45□□□□□ -1.86
CHRNA9-201ENST00000310169 MT1MQ8N339 61 aa3.4□□□□□ -1.87
CHRNA9-201ENST00000310169 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
CHRNA9-201ENST00000310169 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
CHRNA9-201ENST00000310169 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CHRNA9-201ENST00000310169 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
CHRNA9-201ENST00000310169 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
CHRNA9-201ENST00000310169 MT4P47944 62 aa3.14□□□□□ -1.91
CHRNA9-201ENST00000310169 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
CHRNA9-201ENST00000310169 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CHRNA9-201ENST00000310169 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
CHRNA9-201ENST00000310169 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.93
CHRNA9-201ENST00000310169 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CHRNA9-201ENST00000310169 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
CHRNA9-201ENST00000310169 MT1AP04731 61 aa2.94□□□□□ -1.94
CHRNA9-201ENST00000310169 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CHRNA9-201ENST00000310169 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CHRNA9-201ENST00000310169 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
CHRNA9-201ENST00000310169 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
CHRNA9-201ENST00000310169 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
CHRNA9-201ENST00000310169 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CHRNA9-201ENST00000310169 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
CHRNA9-201ENST00000310169 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CHRNA9-201ENST00000310169 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
CHRNA9-201ENST00000310169 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
CHRNA9-201ENST00000310169 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CHRNA9-201ENST00000310169 MT3P25713 68 aa2.7□□□□□ -1.98
CHRNA9-201ENST00000310169 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
CHRNA9-201ENST00000310169 PRM1P04553 51 aa2.67□□□□□ -1.98
CHRNA9-201ENST00000310169 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CHRNA9-201ENST00000310169 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CHRNA9-201ENST00000310169 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
CHRNA9-201ENST00000310169 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CHRNA9-201ENST00000310169 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CHRNA9-201ENST00000310169 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CHRNA9-201ENST00000310169 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
CHRNA9-201ENST00000310169 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CHRNA9-201ENST00000310169 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
CHRNA9-201ENST00000310169 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CHRNA9-201ENST00000310169 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
CHRNA9-201ENST00000310169 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 52.3 ms