RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 KRTAP2-1Q9BYU5 128 aa7.24□□□□□ -1.25
VEGFB-201ENST00000309422 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
VEGFB-201ENST00000309422 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
VEGFB-201ENST00000309422 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
VEGFB-201ENST00000309422 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
VEGFB-201ENST00000309422 MT1GP13640 62 aa7.13□□□□□ -1.27
VEGFB-201ENST00000309422 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
VEGFB-201ENST00000309422 MT1LQ93083 61 aa7.06□□□□□ -1.28
VEGFB-201ENST00000309422 ROMO1P60602 79 aa7.01□□□□□ -1.29
VEGFB-201ENST00000309422 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
VEGFB-201ENST00000309422 MT1MQ8N339 61 aa6.97□□□□□ -1.29
VEGFB-201ENST00000309422 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
VEGFB-201ENST00000309422 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
VEGFB-201ENST00000309422 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
VEGFB-201ENST00000309422 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.33
VEGFB-201ENST00000309422 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
VEGFB-201ENST00000309422 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.35
VEGFB-201ENST00000309422 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
VEGFB-201ENST00000309422 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
VEGFB-201ENST00000309422 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
VEGFB-201ENST00000309422 MT4P47944 62 aa6.5□□□□□ -1.37
VEGFB-201ENST00000309422 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
VEGFB-201ENST00000309422 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
VEGFB-201ENST00000309422 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
VEGFB-201ENST00000309422 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
VEGFB-201ENST00000309422 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
VEGFB-201ENST00000309422 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
VEGFB-201ENST00000309422 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
VEGFB-201ENST00000309422 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
VEGFB-201ENST00000309422 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
VEGFB-201ENST00000309422 PRO0628Q9UI54 55 aa6.15□□□□□ -1.43
VEGFB-201ENST00000309422 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
VEGFB-201ENST00000309422 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
VEGFB-201ENST00000309422 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
VEGFB-201ENST00000309422 MT1AP04731 61 aa6.05□□□□□ -1.44
VEGFB-201ENST00000309422 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
VEGFB-201ENST00000309422 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
VEGFB-201ENST00000309422 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
VEGFB-201ENST00000309422 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
VEGFB-201ENST00000309422 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
VEGFB-201ENST00000309422 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
VEGFB-201ENST00000309422 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
VEGFB-201ENST00000309422 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
VEGFB-201ENST00000309422 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
VEGFB-201ENST00000309422 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.51
VEGFB-201ENST00000309422 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
VEGFB-201ENST00000309422 MT3P25713 68 aa5.56□□□□□ -1.52
VEGFB-201ENST00000309422 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
VEGFB-201ENST00000309422 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
VEGFB-201ENST00000309422 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
VEGFB-201ENST00000309422 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
VEGFB-201ENST00000309422 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
VEGFB-201ENST00000309422 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
VEGFB-201ENST00000309422 LCE1EQ5T753 118 aa5□□□□□ -1.61
VEGFB-201ENST00000309422 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
VEGFB-201ENST00000309422 H3BS24 57 aa4.96□□□□□ -1.62
VEGFB-201ENST00000309422 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
VEGFB-201ENST00000309422 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
VEGFB-201ENST00000309422 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
VEGFB-201ENST00000309422 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
VEGFB-201ENST00000309422 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
VEGFB-201ENST00000309422 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
VEGFB-201ENST00000309422 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
VEGFB-201ENST00000309422 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
VEGFB-201ENST00000309422 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
VEGFB-201ENST00000309422 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
VEGFB-201ENST00000309422 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
VEGFB-201ENST00000309422 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
VEGFB-201ENST00000309422 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
VEGFB-201ENST00000309422 INE1O15225 51 aa3.88□□□□□ -1.79
VEGFB-201ENST00000309422 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
VEGFB-201ENST00000309422 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
VEGFB-201ENST00000309422 PRM1P04553 51 aa3.58□□□□□ -1.84
VEGFB-201ENST00000309422 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
VEGFB-201ENST00000309422 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
VEGFB-201ENST00000309422 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
VEGFB-201ENST00000309422 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 131.9 ms