RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
SSSCA1-201ENST00000309328 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
SSSCA1-201ENST00000309328 SPRR2DP22532 72 aa6.49□□□□□ -1.37
SSSCA1-201ENST00000309328 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
SSSCA1-201ENST00000309328 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
SSSCA1-201ENST00000309328 MT1GP13640 62 aa6.43□□□□□ -1.38
SSSCA1-201ENST00000309328 MT1LQ93083 61 aa6.39□□□□□ -1.39
SSSCA1-201ENST00000309328 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.39
SSSCA1-201ENST00000309328 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
SSSCA1-201ENST00000309328 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
SSSCA1-201ENST00000309328 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
SSSCA1-201ENST00000309328 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
SSSCA1-201ENST00000309328 MT1MQ8N339 61 aa6.26□□□□□ -1.41
SSSCA1-201ENST00000309328 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
SSSCA1-201ENST00000309328 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
SSSCA1-201ENST00000309328 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
SSSCA1-201ENST00000309328 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
SSSCA1-201ENST00000309328 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
SSSCA1-201ENST00000309328 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
SSSCA1-201ENST00000309328 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
SSSCA1-201ENST00000309328 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
SSSCA1-201ENST00000309328 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
SSSCA1-201ENST00000309328 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
SSSCA1-201ENST00000309328 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
SSSCA1-201ENST00000309328 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
SSSCA1-201ENST00000309328 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
SSSCA1-201ENST00000309328 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
SSSCA1-201ENST00000309328 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
SSSCA1-201ENST00000309328 MT4P47944 62 aa5.58□□□□□ -1.52
SSSCA1-201ENST00000309328 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SSSCA1-201ENST00000309328 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SSSCA1-201ENST00000309328 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
SSSCA1-201ENST00000309328 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
SSSCA1-201ENST00000309328 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
SSSCA1-201ENST00000309328 MT1AP04731 61 aa5.47□□□□□ -1.53
SSSCA1-201ENST00000309328 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
SSSCA1-201ENST00000309328 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
SSSCA1-201ENST00000309328 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
SSSCA1-201ENST00000309328 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
SSSCA1-201ENST00000309328 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
SSSCA1-201ENST00000309328 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
SSSCA1-201ENST00000309328 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
SSSCA1-201ENST00000309328 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
SSSCA1-201ENST00000309328 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
SSSCA1-201ENST00000309328 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
SSSCA1-201ENST00000309328 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
SSSCA1-201ENST00000309328 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
SSSCA1-201ENST00000309328 MT3P25713 68 aa5.02□□□□□ -1.61
SSSCA1-201ENST00000309328 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
SSSCA1-201ENST00000309328 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
SSSCA1-201ENST00000309328 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
SSSCA1-201ENST00000309328 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
SSSCA1-201ENST00000309328 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
SSSCA1-201ENST00000309328 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
SSSCA1-201ENST00000309328 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
SSSCA1-201ENST00000309328 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
SSSCA1-201ENST00000309328 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
SSSCA1-201ENST00000309328 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SSSCA1-201ENST00000309328 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
SSSCA1-201ENST00000309328 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
SSSCA1-201ENST00000309328 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SSSCA1-201ENST00000309328 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
SSSCA1-201ENST00000309328 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
SSSCA1-201ENST00000309328 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
SSSCA1-201ENST00000309328 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SSSCA1-201ENST00000309328 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SSSCA1-201ENST00000309328 INE1O15225 51 aa3.7□□□□□ -1.82
SSSCA1-201ENST00000309328 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SSSCA1-201ENST00000309328 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SSSCA1-201ENST00000309328 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
SSSCA1-201ENST00000309328 PRM1P04553 51 aa3.39□□□□□ -1.87
SSSCA1-201ENST00000309328 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
SSSCA1-201ENST00000309328 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SSSCA1-201ENST00000309328 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SSSCA1-201ENST00000309328 H3BS24 57 aa2.75□□□□□ -1.97
SSSCA1-201ENST00000309328 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SSSCA1-201ENST00000309328 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 74.4 ms