RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
CKS1B-201ENST00000308987 ROMO1P60602 79 aa2.44□□□□□ -2.02
CKS1B-201ENST00000308987 S4R3F8 94 aa2.41□□□□□ -2.02
CKS1B-201ENST00000308987 M0R2T5 61 aa2.4□□□□□ -2.03
CKS1B-201ENST00000308987 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
CKS1B-201ENST00000308987 M0QZ58 72 aa2.37□□□□□ -2.03
CKS1B-201ENST00000308987 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
CKS1B-201ENST00000308987 A0A0D9SG42 100 aa2.34□□□□□ -2.03
CKS1B-201ENST00000308987 MT2AP02795 61 aa2.34□□□□□ -2.03
CKS1B-201ENST00000308987 P0C880 135 aa2.34□□□□□ -2.03
CKS1B-201ENST00000308987 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
CKS1B-201ENST00000308987 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
CKS1B-201ENST00000308987 MT1FP04733 61 aa2.33□□□□□ -2.04
CKS1B-201ENST00000308987 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
CKS1B-201ENST00000308987 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
CKS1B-201ENST00000308987 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
CKS1B-201ENST00000308987 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
CKS1B-201ENST00000308987 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
CKS1B-201ENST00000308987 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CKS1B-201ENST00000308987 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
CKS1B-201ENST00000308987 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
CKS1B-201ENST00000308987 R4GN34 69 aa2.24□□□□□ -2.05
CKS1B-201ENST00000308987 NEBP20929 6669 aa2.22□□□□□ -2.05
CKS1B-201ENST00000308987 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
CKS1B-201ENST00000308987 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CKS1B-201ENST00000308987 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
CKS1B-201ENST00000308987 KMT2DO14686 5537 aa2.17□□□□□ -2.06
CKS1B-201ENST00000308987 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
CKS1B-201ENST00000308987 KRTAP20-1Q3LI63 56 aa2.14□□□□□ -2.07
CKS1B-201ENST00000308987 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
CKS1B-201ENST00000308987 MT1BP07438 61 aa2.11□□□□□ -2.07
CKS1B-201ENST00000308987 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
CKS1B-201ENST00000308987 TNP1P09430 55 aa2.09□□□□□ -2.07
CKS1B-201ENST00000308987 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
CKS1B-201ENST00000308987 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
CKS1B-201ENST00000308987 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
CKS1B-201ENST00000308987 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
CKS1B-201ENST00000308987 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
CKS1B-201ENST00000308987 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
CKS1B-201ENST00000308987 SPRR2EP22531 72 aa1.98□□□□□ -2.09
CKS1B-201ENST00000308987 SPRR2BP35325 72 aa1.98□□□□□ -2.09
CKS1B-201ENST00000308987 SPRR2AP35326 72 aa1.98□□□□□ -2.09
CKS1B-201ENST00000308987 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
CKS1B-201ENST00000308987 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
CKS1B-201ENST00000308987 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CKS1B-201ENST00000308987 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
CKS1B-201ENST00000308987 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
CKS1B-201ENST00000308987 MT1XP80297 61 aa1.93□□□□□ -2.1
CKS1B-201ENST00000308987 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CKS1B-201ENST00000308987 INE1O15225 51 aa1.87□□□□□ -2.11
CKS1B-201ENST00000308987 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
CKS1B-201ENST00000308987 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
CKS1B-201ENST00000308987 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
CKS1B-201ENST00000308987 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
CKS1B-201ENST00000308987 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CKS1B-201ENST00000308987 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
CKS1B-201ENST00000308987 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
CKS1B-201ENST00000308987 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CKS1B-201ENST00000308987 MT1EP04732 61 aa1.71□□□□□ -2.14
CKS1B-201ENST00000308987 MT4P47944 62 aa1.7□□□□□ -2.14
CKS1B-201ENST00000308987 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
CKS1B-201ENST00000308987 MT1MQ8N339 61 aa1.64□□□□□ -2.15
CKS1B-201ENST00000308987 MT1GP13640 62 aa1.63□□□□□ -2.15
CKS1B-201ENST00000308987 MT1LQ93083 61 aa1.63□□□□□ -2.15
CKS1B-201ENST00000308987 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CKS1B-201ENST00000308987 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
CKS1B-201ENST00000308987 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
CKS1B-201ENST00000308987 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
CKS1B-201ENST00000308987 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
CKS1B-201ENST00000308987 MT1AP04731 61 aa1.46□□□□□ -2.18
CKS1B-201ENST00000308987 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
CKS1B-201ENST00000308987 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
CKS1B-201ENST00000308987 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
CKS1B-201ENST00000308987 PRM1P04553 51 aa1.26□□□□□ -2.21
CKS1B-201ENST00000308987 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
CKS1B-201ENST00000308987 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
CKS1B-201ENST00000308987 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms