RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
RAB40A-201ENST00000304236 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
RAB40A-201ENST00000304236 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
RAB40A-201ENST00000304236 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
RAB40A-201ENST00000304236 SPRR2EP22531 72 aa5.21□□□□□ -1.58
RAB40A-201ENST00000304236 SPRR2BP35325 72 aa5.21□□□□□ -1.58
RAB40A-201ENST00000304236 SPRR2AP35326 72 aa5.21□□□□□ -1.58
RAB40A-201ENST00000304236 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
RAB40A-201ENST00000304236 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
RAB40A-201ENST00000304236 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
RAB40A-201ENST00000304236 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
RAB40A-201ENST00000304236 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
RAB40A-201ENST00000304236 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
RAB40A-201ENST00000304236 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
RAB40A-201ENST00000304236 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
RAB40A-201ENST00000304236 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
RAB40A-201ENST00000304236 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
RAB40A-201ENST00000304236 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
RAB40A-201ENST00000304236 INE1O15225 51 aa5.05□□□□□ -1.6
RAB40A-201ENST00000304236 SPRR2DP22532 72 aa5.04□□□□□ -1.6
RAB40A-201ENST00000304236 MT1EP04732 61 aa4.95□□□□□ -1.62
RAB40A-201ENST00000304236 MT1LQ93083 61 aa4.93□□□□□ -1.62
RAB40A-201ENST00000304236 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
RAB40A-201ENST00000304236 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
RAB40A-201ENST00000304236 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
RAB40A-201ENST00000304236 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
RAB40A-201ENST00000304236 MT1GP13640 62 aa4.67□□□□□ -1.66
RAB40A-201ENST00000304236 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
RAB40A-201ENST00000304236 MT1MQ8N339 61 aa4.64□□□□□ -1.67
RAB40A-201ENST00000304236 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
RAB40A-201ENST00000304236 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
RAB40A-201ENST00000304236 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
RAB40A-201ENST00000304236 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
RAB40A-201ENST00000304236 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
RAB40A-201ENST00000304236 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
RAB40A-201ENST00000304236 MT4P47944 62 aa4.41□□□□□ -1.7
RAB40A-201ENST00000304236 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
RAB40A-201ENST00000304236 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
RAB40A-201ENST00000304236 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
RAB40A-201ENST00000304236 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
RAB40A-201ENST00000304236 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
RAB40A-201ENST00000304236 MT1AP04731 61 aa4.19□□□□□ -1.74
RAB40A-201ENST00000304236 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
RAB40A-201ENST00000304236 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
RAB40A-201ENST00000304236 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.74
RAB40A-201ENST00000304236 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
RAB40A-201ENST00000304236 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
RAB40A-201ENST00000304236 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
RAB40A-201ENST00000304236 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
RAB40A-201ENST00000304236 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
RAB40A-201ENST00000304236 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
RAB40A-201ENST00000304236 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
RAB40A-201ENST00000304236 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
RAB40A-201ENST00000304236 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
RAB40A-201ENST00000304236 MT3P25713 68 aa3.78□□□□□ -1.8
RAB40A-201ENST00000304236 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
RAB40A-201ENST00000304236 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
RAB40A-201ENST00000304236 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
RAB40A-201ENST00000304236 PRM1P04553 51 aa3.67□□□□□ -1.82
RAB40A-201ENST00000304236 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
RAB40A-201ENST00000304236 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
RAB40A-201ENST00000304236 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
RAB40A-201ENST00000304236 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
RAB40A-201ENST00000304236 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
RAB40A-201ENST00000304236 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
RAB40A-201ENST00000304236 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
RAB40A-201ENST00000304236 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
RAB40A-201ENST00000304236 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
RAB40A-201ENST00000304236 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
RAB40A-201ENST00000304236 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
RAB40A-201ENST00000304236 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
RAB40A-201ENST00000304236 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
RAB40A-201ENST00000304236 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
RAB40A-201ENST00000304236 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
RAB40A-201ENST00000304236 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
RAB40A-201ENST00000304236 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
RAB40A-201ENST00000304236 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 138.7 ms