RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ROMO1P60602 79 aa2.62□□□□□ -1.99
ITGB1-201ENST00000302278 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
ITGB1-201ENST00000302278 A0A1B0GU33 70 aa2.6□□□□□ -1.99
ITGB1-201ENST00000302278 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
ITGB1-201ENST00000302278 PLAC4Q8WY50 150 aa2.56□□□□□ -2
ITGB1-201ENST00000302278 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
ITGB1-201ENST00000302278 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
ITGB1-201ENST00000302278 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
ITGB1-201ENST00000302278 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
ITGB1-201ENST00000302278 LCE1DQ5T752 114 aa2.53□□□□□ -2.01
ITGB1-201ENST00000302278 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
ITGB1-201ENST00000302278 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
ITGB1-201ENST00000302278 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
ITGB1-201ENST00000302278 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
ITGB1-201ENST00000302278 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
ITGB1-201ENST00000302278 A0A0D9SG42 100 aa2.48□□□□□ -2.01
ITGB1-201ENST00000302278 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
ITGB1-201ENST00000302278 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
ITGB1-201ENST00000302278 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
ITGB1-201ENST00000302278 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
ITGB1-201ENST00000302278 MT1EP04732 61 aa2.45□□□□□ -2.02
ITGB1-201ENST00000302278 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
ITGB1-201ENST00000302278 R4GN34 69 aa2.44□□□□□ -2.02
ITGB1-201ENST00000302278 P0C880 135 aa2.42□□□□□ -2.02
ITGB1-201ENST00000302278 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
ITGB1-201ENST00000302278 M0QZ58 72 aa2.41□□□□□ -2.02
ITGB1-201ENST00000302278 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
ITGB1-201ENST00000302278 MT1GP13640 62 aa2.39□□□□□ -2.03
ITGB1-201ENST00000302278 MT4P47944 62 aa2.38□□□□□ -2.03
ITGB1-201ENST00000302278 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
ITGB1-201ENST00000302278 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
ITGB1-201ENST00000302278 KRTAP15-1Q3LI76 137 aa2.35□□□□□ -2.03
ITGB1-201ENST00000302278 MT1MQ8N339 61 aa2.34□□□□□ -2.04
ITGB1-201ENST00000302278 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
ITGB1-201ENST00000302278 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
ITGB1-201ENST00000302278 MT1LQ93083 61 aa2.29□□□□□ -2.04
ITGB1-201ENST00000302278 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
ITGB1-201ENST00000302278 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
ITGB1-201ENST00000302278 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-201ENST00000302278 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
ITGB1-201ENST00000302278 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
ITGB1-201ENST00000302278 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
ITGB1-201ENST00000302278 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
ITGB1-201ENST00000302278 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
ITGB1-201ENST00000302278 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
ITGB1-201ENST00000302278 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
ITGB1-201ENST00000302278 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
ITGB1-201ENST00000302278 TNP1P09430 55 aa2.12□□□□□ -2.07
ITGB1-201ENST00000302278 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-201ENST00000302278 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
ITGB1-201ENST00000302278 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
ITGB1-201ENST00000302278 INE1O15225 51 aa2.04□□□□□ -2.08
ITGB1-201ENST00000302278 KRTAP12-3P60328 96 aa2□□□□□ -2.09
ITGB1-201ENST00000302278 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
ITGB1-201ENST00000302278 MT1AP04731 61 aa1.96□□□□□ -2.1
ITGB1-201ENST00000302278 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
ITGB1-201ENST00000302278 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
ITGB1-201ENST00000302278 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
ITGB1-201ENST00000302278 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
ITGB1-201ENST00000302278 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
ITGB1-201ENST00000302278 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-201ENST00000302278 LCE1EQ5T753 118 aa1.78□□□□□ -2.13
ITGB1-201ENST00000302278 MT3P25713 68 aa1.77□□□□□ -2.13
ITGB1-201ENST00000302278 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
ITGB1-201ENST00000302278 LCE3EQ5T5B0 92 aa1.72□□□□□ -2.13
ITGB1-201ENST00000302278 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
ITGB1-201ENST00000302278 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
ITGB1-201ENST00000302278 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
ITGB1-201ENST00000302278 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
ITGB1-201ENST00000302278 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
ITGB1-201ENST00000302278 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ITGB1-201ENST00000302278 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
ITGB1-201ENST00000302278 PRM1P04553 51 aa1.34□□□□□ -2.19
ITGB1-201ENST00000302278 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
ITGB1-201ENST00000302278 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
ITGB1-201ENST00000302278 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
ITGB1-201ENST00000302278 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms