RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
TPM3-202ENST00000302206 MT1XP80297 61 aa4.94□□□□□ -1.62
TPM3-202ENST00000302206 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
TPM3-202ENST00000302206 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
TPM3-202ENST00000302206 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
TPM3-202ENST00000302206 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
TPM3-202ENST00000302206 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
TPM3-202ENST00000302206 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
TPM3-202ENST00000302206 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
TPM3-202ENST00000302206 KMT2DO14686 5537 aa4.74□□□□□ -1.65
TPM3-202ENST00000302206 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
TPM3-202ENST00000302206 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
TPM3-202ENST00000302206 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
TPM3-202ENST00000302206 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
TPM3-202ENST00000302206 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
TPM3-202ENST00000302206 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
TPM3-202ENST00000302206 MT3P25713 68 aa4.57□□□□□ -1.68
TPM3-202ENST00000302206 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
TPM3-202ENST00000302206 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
TPM3-202ENST00000302206 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
TPM3-202ENST00000302206 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TPM3-202ENST00000302206 SPRR2EP22531 72 aa4.53□□□□□ -1.68
TPM3-202ENST00000302206 SPRR2BP35325 72 aa4.53□□□□□ -1.68
TPM3-202ENST00000302206 SPRR2AP35326 72 aa4.53□□□□□ -1.68
TPM3-202ENST00000302206 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
TPM3-202ENST00000302206 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
TPM3-202ENST00000302206 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
TPM3-202ENST00000302206 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
TPM3-202ENST00000302206 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
TPM3-202ENST00000302206 SPRR2DP22532 72 aa4.39□□□□□ -1.71
TPM3-202ENST00000302206 MT1EP04732 61 aa4.33□□□□□ -1.72
TPM3-202ENST00000302206 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
TPM3-202ENST00000302206 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
TPM3-202ENST00000302206 MT1LQ93083 61 aa4.26□□□□□ -1.73
TPM3-202ENST00000302206 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TPM3-202ENST00000302206 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
TPM3-202ENST00000302206 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
TPM3-202ENST00000302206 MT1GP13640 62 aa4.13□□□□□ -1.75
TPM3-202ENST00000302206 MT1MQ8N339 61 aa4.07□□□□□ -1.76
TPM3-202ENST00000302206 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
TPM3-202ENST00000302206 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
TPM3-202ENST00000302206 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
TPM3-202ENST00000302206 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
TPM3-202ENST00000302206 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
TPM3-202ENST00000302206 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
TPM3-202ENST00000302206 MT4P47944 62 aa3.87□□□□□ -1.79
TPM3-202ENST00000302206 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
TPM3-202ENST00000302206 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
TPM3-202ENST00000302206 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
TPM3-202ENST00000302206 MT1AP04731 61 aa3.64□□□□□ -1.83
TPM3-202ENST00000302206 INE1O15225 51 aa3.59□□□□□ -1.83
TPM3-202ENST00000302206 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
TPM3-202ENST00000302206 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
TPM3-202ENST00000302206 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
TPM3-202ENST00000302206 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
TPM3-202ENST00000302206 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
TPM3-202ENST00000302206 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
TPM3-202ENST00000302206 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
TPM3-202ENST00000302206 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TPM3-202ENST00000302206 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TPM3-202ENST00000302206 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
TPM3-202ENST00000302206 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
TPM3-202ENST00000302206 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TPM3-202ENST00000302206 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
TPM3-202ENST00000302206 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
TPM3-202ENST00000302206 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
TPM3-202ENST00000302206 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
TPM3-202ENST00000302206 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
TPM3-202ENST00000302206 PRM1P04553 51 aa2.77□□□□□ -1.97
TPM3-202ENST00000302206 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
TPM3-202ENST00000302206 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
TPM3-202ENST00000302206 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
TPM3-202ENST00000302206 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TPM3-202ENST00000302206 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
TPM3-202ENST00000302206 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
TPM3-202ENST00000302206 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TPM3-202ENST00000302206 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 99.2 ms