RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 MT1BP07438 61 aa2.44□□□□□ -2.02
VCAM1-201ENST00000294728 MT1XP80297 61 aa2.44□□□□□ -2.02
VCAM1-201ENST00000294728 PRO2289Q9P1D8 64 aa2.42□□□□□ -2.02
VCAM1-201ENST00000294728 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.02
VCAM1-201ENST00000294728 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.02
VCAM1-201ENST00000294728 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.02
VCAM1-201ENST00000294728 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.03
VCAM1-201ENST00000294728 LCE1DQ5T752 114 aa2.39□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
VCAM1-201ENST00000294728 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
VCAM1-201ENST00000294728 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
VCAM1-201ENST00000294728 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
VCAM1-201ENST00000294728 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
VCAM1-201ENST00000294728 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
VCAM1-201ENST00000294728 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
VCAM1-201ENST00000294728 KRTAP2-2Q9BYT5 123 aa2.26□□□□□ -2.05
VCAM1-201ENST00000294728 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
VCAM1-201ENST00000294728 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
VCAM1-201ENST00000294728 KMT2DO14686 5537 aa2.22□□□□□ -2.05
VCAM1-201ENST00000294728 SPRR2EP22531 72 aa2.21□□□□□ -2.05
VCAM1-201ENST00000294728 SPRR2BP35325 72 aa2.21□□□□□ -2.05
VCAM1-201ENST00000294728 SPRR2AP35326 72 aa2.21□□□□□ -2.05
VCAM1-201ENST00000294728 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
VCAM1-201ENST00000294728 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
VCAM1-201ENST00000294728 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
VCAM1-201ENST00000294728 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
VCAM1-201ENST00000294728 KRTAP4-11Q9BYQ6 195 aa2.17□□□□□ -2.06
VCAM1-201ENST00000294728 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
VCAM1-201ENST00000294728 SPRR2DP22532 72 aa2.15□□□□□ -2.07
VCAM1-201ENST00000294728 MT1LQ93083 61 aa2.12□□□□□ -2.07
VCAM1-201ENST00000294728 MT1EP04732 61 aa2.12□□□□□ -2.07
VCAM1-201ENST00000294728 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
VCAM1-201ENST00000294728 LCE4AQ5TA78 99 aa2.11□□□□□ -2.07
VCAM1-201ENST00000294728 MT1GP13640 62 aa2□□□□□ -2.09
VCAM1-201ENST00000294728 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
VCAM1-201ENST00000294728 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
VCAM1-201ENST00000294728 MT1MQ8N339 61 aa1.97□□□□□ -2.09
VCAM1-201ENST00000294728 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
VCAM1-201ENST00000294728 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
VCAM1-201ENST00000294728 MT1AP04731 61 aa1.92□□□□□ -2.1
VCAM1-201ENST00000294728 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
VCAM1-201ENST00000294728 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
VCAM1-201ENST00000294728 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
VCAM1-201ENST00000294728 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
VCAM1-201ENST00000294728 MT4P47944 62 aa1.87□□□□□ -2.11
VCAM1-201ENST00000294728 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
VCAM1-201ENST00000294728 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
VCAM1-201ENST00000294728 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
VCAM1-201ENST00000294728 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
VCAM1-201ENST00000294728 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
VCAM1-201ENST00000294728 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
VCAM1-201ENST00000294728 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
VCAM1-201ENST00000294728 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
VCAM1-201ENST00000294728 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
VCAM1-201ENST00000294728 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
VCAM1-201ENST00000294728 PRM1P04553 51 aa1.63□□□□□ -2.15
VCAM1-201ENST00000294728 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
VCAM1-201ENST00000294728 MT3P25713 68 aa1.63□□□□□ -2.15
VCAM1-201ENST00000294728 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
VCAM1-201ENST00000294728 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
VCAM1-201ENST00000294728 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
VCAM1-201ENST00000294728 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
VCAM1-201ENST00000294728 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
VCAM1-201ENST00000294728 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
VCAM1-201ENST00000294728 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
VCAM1-201ENST00000294728 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
VCAM1-201ENST00000294728 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
VCAM1-201ENST00000294728 LCE1CQ5T751 118 aa1.29□□□□□ -2.2
VCAM1-201ENST00000294728 LCE1BQ5T7P3 118 aa1.29□□□□□ -2.2
VCAM1-201ENST00000294728 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
VCAM1-201ENST00000294728 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
VCAM1-201ENST00000294728 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
VCAM1-201ENST00000294728 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 92 ms