RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
TFF1-201ENST00000291527 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
TFF1-201ENST00000291527 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
TFF1-201ENST00000291527 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
TFF1-201ENST00000291527 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
TFF1-201ENST00000291527 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
TFF1-201ENST00000291527 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
TFF1-201ENST00000291527 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
TFF1-201ENST00000291527 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
TFF1-201ENST00000291527 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
TFF1-201ENST00000291527 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
TFF1-201ENST00000291527 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
TFF1-201ENST00000291527 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
TFF1-201ENST00000291527 TNP1P09430 55 aa3.38□□□□□ -1.87
TFF1-201ENST00000291527 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
TFF1-201ENST00000291527 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
TFF1-201ENST00000291527 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
TFF1-201ENST00000291527 MT1EP04732 61 aa3.3□□□□□ -1.88
TFF1-201ENST00000291527 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
TFF1-201ENST00000291527 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
TFF1-201ENST00000291527 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
TFF1-201ENST00000291527 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.89
TFF1-201ENST00000291527 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
TFF1-201ENST00000291527 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
TFF1-201ENST00000291527 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
TFF1-201ENST00000291527 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
TFF1-201ENST00000291527 MT4P47944 62 aa3.2□□□□□ -1.9
TFF1-201ENST00000291527 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
TFF1-201ENST00000291527 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
TFF1-201ENST00000291527 MT1MQ8N339 61 aa3.16□□□□□ -1.9
TFF1-201ENST00000291527 MT1GP13640 62 aa3.15□□□□□ -1.91
TFF1-201ENST00000291527 MT1LQ93083 61 aa3.13□□□□□ -1.91
TFF1-201ENST00000291527 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
TFF1-201ENST00000291527 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
TFF1-201ENST00000291527 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
TFF1-201ENST00000291527 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
TFF1-201ENST00000291527 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
TFF1-201ENST00000291527 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
TFF1-201ENST00000291527 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
TFF1-201ENST00000291527 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
TFF1-201ENST00000291527 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
TFF1-201ENST00000291527 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
TFF1-201ENST00000291527 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
TFF1-201ENST00000291527 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
TFF1-201ENST00000291527 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
TFF1-201ENST00000291527 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
TFF1-201ENST00000291527 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
TFF1-201ENST00000291527 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
TFF1-201ENST00000291527 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
TFF1-201ENST00000291527 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
TFF1-201ENST00000291527 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
TFF1-201ENST00000291527 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
TFF1-201ENST00000291527 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
TFF1-201ENST00000291527 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
TFF1-201ENST00000291527 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
TFF1-201ENST00000291527 MT1AP04731 61 aa2.63□□□□□ -1.99
TFF1-201ENST00000291527 INE1O15225 51 aa2.62□□□□□ -1.99
TFF1-201ENST00000291527 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
TFF1-201ENST00000291527 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
TFF1-201ENST00000291527 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
TFF1-201ENST00000291527 MT3P25713 68 aa2.47□□□□□ -2.01
TFF1-201ENST00000291527 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
TFF1-201ENST00000291527 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
TFF1-201ENST00000291527 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
TFF1-201ENST00000291527 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
TFF1-201ENST00000291527 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
TFF1-201ENST00000291527 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
TFF1-201ENST00000291527 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
TFF1-201ENST00000291527 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
TFF1-201ENST00000291527 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
TFF1-201ENST00000291527 PRM1P04553 51 aa1.86□□□□□ -2.11
TFF1-201ENST00000291527 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
TFF1-201ENST00000291527 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
TFF1-201ENST00000291527 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
TFF1-201ENST00000291527 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
TFF1-201ENST00000291527 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
TFF1-201ENST00000291527 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 32 ms