RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 A8MU10 97 aa5.92□□□□□ -1.46
PDE6D-201ENST00000287600 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
PDE6D-201ENST00000287600 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
PDE6D-201ENST00000287600 UQCR11O14957 56 aa5.77□□□□□ -1.49
PDE6D-201ENST00000287600 PCP4P48539 62 aa5.77□□□□□ -1.49
PDE6D-201ENST00000287600 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
PDE6D-201ENST00000287600 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PDE6D-201ENST00000287600 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
PDE6D-201ENST00000287600 V9GYY9 64 aa5.69□□□□□ -1.5
PDE6D-201ENST00000287600 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
PDE6D-201ENST00000287600 PSPHP1O15172 72 aa5.66□□□□□ -1.5
PDE6D-201ENST00000287600 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
PDE6D-201ENST00000287600 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
PDE6D-201ENST00000287600 MT1EP04732 61 aa5.65□□□□□ -1.5
PDE6D-201ENST00000287600 Q1T7F1 81 aa5.65□□□□□ -1.5
PDE6D-201ENST00000287600 TNP1P09430 55 aa5.64□□□□□ -1.51
PDE6D-201ENST00000287600 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
PDE6D-201ENST00000287600 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
PDE6D-201ENST00000287600 K7ERS5 55 aa5.53□□□□□ -1.52
PDE6D-201ENST00000287600 MT3P25713 68 aa5.5□□□□□ -1.53
PDE6D-201ENST00000287600 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
PDE6D-201ENST00000287600 A6NED7 52 aa5.48□□□□□ -1.53
PDE6D-201ENST00000287600 MT1GP13640 62 aa5.47□□□□□ -1.53
PDE6D-201ENST00000287600 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
PDE6D-201ENST00000287600 MT4P47944 62 aa5.44□□□□□ -1.54
PDE6D-201ENST00000287600 KRTAP5-11Q6L8G4 156 aa5.43□□□□□ -1.54
PDE6D-201ENST00000287600 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
PDE6D-201ENST00000287600 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
PDE6D-201ENST00000287600 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.4□□□□□ -1.54
PDE6D-201ENST00000287600 MT1MQ8N339 61 aa5.4□□□□□ -1.54
PDE6D-201ENST00000287600 MT1LQ93083 61 aa5.4□□□□□ -1.54
PDE6D-201ENST00000287600 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
PDE6D-201ENST00000287600 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
PDE6D-201ENST00000287600 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
PDE6D-201ENST00000287600 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
PDE6D-201ENST00000287600 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
PDE6D-201ENST00000287600 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
PDE6D-201ENST00000287600 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
PDE6D-201ENST00000287600 ROMO1P60602 79 aa5.18□□□□□ -1.58
PDE6D-201ENST00000287600 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
PDE6D-201ENST00000287600 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
PDE6D-201ENST00000287600 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
PDE6D-201ENST00000287600 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
PDE6D-201ENST00000287600 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
PDE6D-201ENST00000287600 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
PDE6D-201ENST00000287600 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
PDE6D-201ENST00000287600 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
PDE6D-201ENST00000287600 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
PDE6D-201ENST00000287600 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
PDE6D-201ENST00000287600 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
PDE6D-201ENST00000287600 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
PDE6D-201ENST00000287600 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
PDE6D-201ENST00000287600 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
PDE6D-201ENST00000287600 MT1AP04731 61 aa4.59□□□□□ -1.67
PDE6D-201ENST00000287600 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
PDE6D-201ENST00000287600 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
PDE6D-201ENST00000287600 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
PDE6D-201ENST00000287600 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
PDE6D-201ENST00000287600 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
PDE6D-201ENST00000287600 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
PDE6D-201ENST00000287600 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
PDE6D-201ENST00000287600 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
PDE6D-201ENST00000287600 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
PDE6D-201ENST00000287600 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
PDE6D-201ENST00000287600 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
PDE6D-201ENST00000287600 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
PDE6D-201ENST00000287600 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
PDE6D-201ENST00000287600 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
PDE6D-201ENST00000287600 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
PDE6D-201ENST00000287600 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
PDE6D-201ENST00000287600 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
PDE6D-201ENST00000287600 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PDE6D-201ENST00000287600 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
PDE6D-201ENST00000287600 PRM1P04553 51 aa2.66□□□□□ -1.98
PDE6D-201ENST00000287600 INE1O15225 51 aa2.49□□□□□ -2.01
PDE6D-201ENST00000287600 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
PDE6D-201ENST00000287600 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 130 ms