RNA–Protein interactions for RNA: ENST00000268057.8

BBS4-201, Transcript of Bardet-Biedl syndrome 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-201ENST00000268057 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
BBS4-201ENST00000268057 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
BBS4-201ENST00000268057 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
BBS4-201ENST00000268057 MT2AP02795 61 aa3.46□□□□□ -1.86
BBS4-201ENST00000268057 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
BBS4-201ENST00000268057 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
BBS4-201ENST00000268057 MT1FP04733 61 aa3.4□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP10-10P60014 251 aa3.4□□□□□ -1.87
BBS4-201ENST00000268057 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
BBS4-201ENST00000268057 MT1BP07438 61 aa3.35□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
BBS4-201ENST00000268057 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
BBS4-201ENST00000268057 MT1XP80297 61 aa3.34□□□□□ -1.88
BBS4-201ENST00000268057 MT3P25713 68 aa3.32□□□□□ -1.88
BBS4-201ENST00000268057 INE1O15225 51 aa3.32□□□□□ -1.88
BBS4-201ENST00000268057 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
BBS4-201ENST00000268057 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
BBS4-201ENST00000268057 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
BBS4-201ENST00000268057 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
BBS4-201ENST00000268057 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
BBS4-201ENST00000268057 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
BBS4-201ENST00000268057 SPRR2EP22531 72 aa3.14□□□□□ -1.91
BBS4-201ENST00000268057 SPRR2BP35325 72 aa3.14□□□□□ -1.91
BBS4-201ENST00000268057 SPRR2AP35326 72 aa3.14□□□□□ -1.91
BBS4-201ENST00000268057 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
BBS4-201ENST00000268057 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
BBS4-201ENST00000268057 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
BBS4-201ENST00000268057 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
BBS4-201ENST00000268057 SPRR2DP22532 72 aa3.07□□□□□ -1.92
BBS4-201ENST00000268057 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
BBS4-201ENST00000268057 KMT2DO14686 5537 aa3.04□□□□□ -1.92
BBS4-201ENST00000268057 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
BBS4-201ENST00000268057 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
BBS4-201ENST00000268057 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
BBS4-201ENST00000268057 MT1LQ93083 61 aa2.91□□□□□ -1.94
BBS4-201ENST00000268057 MT1EP04732 61 aa2.9□□□□□ -1.95
BBS4-201ENST00000268057 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
BBS4-201ENST00000268057 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
BBS4-201ENST00000268057 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
BBS4-201ENST00000268057 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
BBS4-201ENST00000268057 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
BBS4-201ENST00000268057 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
BBS4-201ENST00000268057 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
BBS4-201ENST00000268057 MT1GP13640 62 aa2.73□□□□□ -1.97
BBS4-201ENST00000268057 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
BBS4-201ENST00000268057 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
BBS4-201ENST00000268057 MT1MQ8N339 61 aa2.69□□□□□ -1.98
BBS4-201ENST00000268057 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
BBS4-201ENST00000268057 MT4P47944 62 aa2.6□□□□□ -1.99
BBS4-201ENST00000268057 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
BBS4-201ENST00000268057 MT1AP04731 61 aa2.58□□□□□ -2
BBS4-201ENST00000268057 KRTAP12-4P60329 112 aa2.56□□□□□ -2
BBS4-201ENST00000268057 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
BBS4-201ENST00000268057 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
BBS4-201ENST00000268057 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
BBS4-201ENST00000268057 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
BBS4-201ENST00000268057 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
BBS4-201ENST00000268057 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
BBS4-201ENST00000268057 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
BBS4-201ENST00000268057 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
BBS4-201ENST00000268057 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
BBS4-201ENST00000268057 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
BBS4-201ENST00000268057 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
BBS4-201ENST00000268057 PRM1P04553 51 aa2.26□□□□□ -2.05
BBS4-201ENST00000268057 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
BBS4-201ENST00000268057 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
BBS4-201ENST00000268057 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
BBS4-201ENST00000268057 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
BBS4-201ENST00000268057 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
BBS4-201ENST00000268057 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
BBS4-201ENST00000268057 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
BBS4-201ENST00000268057 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
BBS4-201ENST00000268057 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
BBS4-201ENST00000268057 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 119.6 ms