RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
COMMD4-201ENST00000267935 MT4P47944 62 aa5.13□□□□□ -1.59
COMMD4-201ENST00000267935 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
COMMD4-201ENST00000267935 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
COMMD4-201ENST00000267935 A6NED7 52 aa5.06□□□□□ -1.6
COMMD4-201ENST00000267935 MT1MQ8N339 61 aa5.06□□□□□ -1.6
COMMD4-201ENST00000267935 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
COMMD4-201ENST00000267935 MT1LQ93083 61 aa5.01□□□□□ -1.61
COMMD4-201ENST00000267935 K7ERS5 55 aa5□□□□□ -1.61
COMMD4-201ENST00000267935 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
COMMD4-201ENST00000267935 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.61
COMMD4-201ENST00000267935 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
COMMD4-201ENST00000267935 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
COMMD4-201ENST00000267935 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
COMMD4-201ENST00000267935 TNP1P09430 55 aa4.92□□□□□ -1.62
COMMD4-201ENST00000267935 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
COMMD4-201ENST00000267935 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
COMMD4-201ENST00000267935 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
COMMD4-201ENST00000267935 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
COMMD4-201ENST00000267935 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
COMMD4-201ENST00000267935 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
COMMD4-201ENST00000267935 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
COMMD4-201ENST00000267935 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
COMMD4-201ENST00000267935 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
COMMD4-201ENST00000267935 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
COMMD4-201ENST00000267935 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
COMMD4-201ENST00000267935 ROMO1P60602 79 aa4.69□□□□□ -1.66
COMMD4-201ENST00000267935 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
COMMD4-201ENST00000267935 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
COMMD4-201ENST00000267935 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
COMMD4-201ENST00000267935 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
COMMD4-201ENST00000267935 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
COMMD4-201ENST00000267935 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
COMMD4-201ENST00000267935 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
COMMD4-201ENST00000267935 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
COMMD4-201ENST00000267935 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
COMMD4-201ENST00000267935 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
COMMD4-201ENST00000267935 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
COMMD4-201ENST00000267935 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
COMMD4-201ENST00000267935 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
COMMD4-201ENST00000267935 MT1AP04731 61 aa4.28□□□□□ -1.72
COMMD4-201ENST00000267935 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
COMMD4-201ENST00000267935 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
COMMD4-201ENST00000267935 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
COMMD4-201ENST00000267935 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
COMMD4-201ENST00000267935 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
COMMD4-201ENST00000267935 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
COMMD4-201ENST00000267935 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
COMMD4-201ENST00000267935 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
COMMD4-201ENST00000267935 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
COMMD4-201ENST00000267935 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
COMMD4-201ENST00000267935 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
COMMD4-201ENST00000267935 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
COMMD4-201ENST00000267935 MT3P25713 68 aa3.98□□□□□ -1.77
COMMD4-201ENST00000267935 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
COMMD4-201ENST00000267935 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
COMMD4-201ENST00000267935 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
COMMD4-201ENST00000267935 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
COMMD4-201ENST00000267935 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
COMMD4-201ENST00000267935 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
COMMD4-201ENST00000267935 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
COMMD4-201ENST00000267935 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
COMMD4-201ENST00000267935 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
COMMD4-201ENST00000267935 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
COMMD4-201ENST00000267935 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
COMMD4-201ENST00000267935 H3BS24 57 aa3.08□□□□□ -1.92
COMMD4-201ENST00000267935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
COMMD4-201ENST00000267935 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
COMMD4-201ENST00000267935 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
COMMD4-201ENST00000267935 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
COMMD4-201ENST00000267935 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
COMMD4-201ENST00000267935 INE1O15225 51 aa2.64□□□□□ -1.99
COMMD4-201ENST00000267935 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
COMMD4-201ENST00000267935 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
COMMD4-201ENST00000267935 PRM1P04553 51 aa2.42□□□□□ -2.02
COMMD4-201ENST00000267935 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
COMMD4-201ENST00000267935 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms