RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
SNRPF-201ENST00000266735 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
SNRPF-201ENST00000266735 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
SNRPF-201ENST00000266735 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.41
SNRPF-201ENST00000266735 SPRR2EP22531 72 aa6.19□□□□□ -1.42
SNRPF-201ENST00000266735 SPRR2BP35325 72 aa6.19□□□□□ -1.42
SNRPF-201ENST00000266735 SPRR2AP35326 72 aa6.19□□□□□ -1.42
SNRPF-201ENST00000266735 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
SNRPF-201ENST00000266735 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
SNRPF-201ENST00000266735 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
SNRPF-201ENST00000266735 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
SNRPF-201ENST00000266735 MT1EP04732 61 aa6.1□□□□□ -1.43
SNRPF-201ENST00000266735 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
SNRPF-201ENST00000266735 ROMO1P60602 79 aa6.07□□□□□ -1.44
SNRPF-201ENST00000266735 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
SNRPF-201ENST00000266735 SPRR2DP22532 72 aa5.98□□□□□ -1.45
SNRPF-201ENST00000266735 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
SNRPF-201ENST00000266735 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
SNRPF-201ENST00000266735 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
SNRPF-201ENST00000266735 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
SNRPF-201ENST00000266735 MT1GP13640 62 aa5.89□□□□□ -1.47
SNRPF-201ENST00000266735 MT1LQ93083 61 aa5.89□□□□□ -1.47
SNRPF-201ENST00000266735 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
SNRPF-201ENST00000266735 MT1MQ8N339 61 aa5.77□□□□□ -1.49
SNRPF-201ENST00000266735 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
SNRPF-201ENST00000266735 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
SNRPF-201ENST00000266735 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
SNRPF-201ENST00000266735 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
SNRPF-201ENST00000266735 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
SNRPF-201ENST00000266735 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
SNRPF-201ENST00000266735 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
SNRPF-201ENST00000266735 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
SNRPF-201ENST00000266735 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.37□□□□□ -1.55
SNRPF-201ENST00000266735 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
SNRPF-201ENST00000266735 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
SNRPF-201ENST00000266735 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
SNRPF-201ENST00000266735 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
SNRPF-201ENST00000266735 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
SNRPF-201ENST00000266735 MT4P47944 62 aa5.19□□□□□ -1.58
SNRPF-201ENST00000266735 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SNRPF-201ENST00000266735 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
SNRPF-201ENST00000266735 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SNRPF-201ENST00000266735 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
SNRPF-201ENST00000266735 MT1AP04731 61 aa5.03□□□□□ -1.6
SNRPF-201ENST00000266735 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
SNRPF-201ENST00000266735 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
SNRPF-201ENST00000266735 SVIPQ8NHG7 77 aa5□□□□□ -1.61
SNRPF-201ENST00000266735 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
SNRPF-201ENST00000266735 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
SNRPF-201ENST00000266735 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
SNRPF-201ENST00000266735 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
SNRPF-201ENST00000266735 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
SNRPF-201ENST00000266735 MT3P25713 68 aa4.74□□□□□ -1.65
SNRPF-201ENST00000266735 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
SNRPF-201ENST00000266735 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
SNRPF-201ENST00000266735 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
SNRPF-201ENST00000266735 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
SNRPF-201ENST00000266735 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
SNRPF-201ENST00000266735 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
SNRPF-201ENST00000266735 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SNRPF-201ENST00000266735 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
SNRPF-201ENST00000266735 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
SNRPF-201ENST00000266735 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
SNRPF-201ENST00000266735 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
SNRPF-201ENST00000266735 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
SNRPF-201ENST00000266735 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
SNRPF-201ENST00000266735 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
SNRPF-201ENST00000266735 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
SNRPF-201ENST00000266735 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
SNRPF-201ENST00000266735 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SNRPF-201ENST00000266735 INE1O15225 51 aa3.28□□□□□ -1.88
SNRPF-201ENST00000266735 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
SNRPF-201ENST00000266735 PRM1P04553 51 aa3.12□□□□□ -1.91
SNRPF-201ENST00000266735 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SNRPF-201ENST00000266735 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SNRPF-201ENST00000266735 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
SNRPF-201ENST00000266735 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms