RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
CCNE1-201ENST00000262643 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
CCNE1-201ENST00000262643 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
CCNE1-201ENST00000262643 SPRR2DP22532 72 aa8.09□□□□□ -1.11
CCNE1-201ENST00000262643 KRTAP19-7Q3SYF9 63 aa7.96□□□□□ -1.14
CCNE1-201ENST00000262643 KRTAP2-2Q9BYT5 123 aa7.92□□□□□ -1.14
CCNE1-201ENST00000262643 KRTAP2-1Q9BYU5 128 aa7.92□□□□□ -1.14
CCNE1-201ENST00000262643 MT1EP04732 61 aa7.88□□□□□ -1.15
CCNE1-201ENST00000262643 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
CCNE1-201ENST00000262643 KRTAP19-5Q3LI72 72 aa7.82□□□□□ -1.16
CCNE1-201ENST00000262643 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
CCNE1-201ENST00000262643 KRTAP19-3Q7Z4W3 81 aa7.78□□□□□ -1.16
CCNE1-201ENST00000262643 LCE5AQ5TCM9 118 aa7.78□□□□□ -1.16
CCNE1-201ENST00000262643 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
CCNE1-201ENST00000262643 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
CCNE1-201ENST00000262643 MT1GP13640 62 aa7.61□□□□□ -1.19
CCNE1-201ENST00000262643 MT1LQ93083 61 aa7.56□□□□□ -1.2
CCNE1-201ENST00000262643 MT1MQ8N339 61 aa7.49□□□□□ -1.21
CCNE1-201ENST00000262643 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
CCNE1-201ENST00000262643 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
CCNE1-201ENST00000262643 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
CCNE1-201ENST00000262643 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
CCNE1-201ENST00000262643 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
CCNE1-201ENST00000262643 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
CCNE1-201ENST00000262643 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
CCNE1-201ENST00000262643 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.27
CCNE1-201ENST00000262643 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
CCNE1-201ENST00000262643 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
CCNE1-201ENST00000262643 MT4P47944 62 aa7.09□□□□□ -1.27
CCNE1-201ENST00000262643 KRTAP5-4Q6L8H1 288 aa7.02□□□□□ -1.29
CCNE1-201ENST00000262643 HMCN1Q96RW7 5635 aa7.02□□□□□ -1.29
CCNE1-201ENST00000262643 KRTAP9-6A8MVA2 160 aa6.94□□□□□ -1.3
CCNE1-201ENST00000262643 GPR98Q8WXG9 6306 aa6.92□□□□□ -1.3
CCNE1-201ENST00000262643 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
CCNE1-201ENST00000262643 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
CCNE1-201ENST00000262643 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
CCNE1-201ENST00000262643 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
CCNE1-201ENST00000262643 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
CCNE1-201ENST00000262643 KRTAP20-2Q3LI61 65 aa6.64□□□□□ -1.35
CCNE1-201ENST00000262643 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
CCNE1-201ENST00000262643 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
CCNE1-201ENST00000262643 H3BS24 57 aa6.47□□□□□ -1.37
CCNE1-201ENST00000262643 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
CCNE1-201ENST00000262643 MT1AP04731 61 aa6.42□□□□□ -1.38
CCNE1-201ENST00000262643 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.38
CCNE1-201ENST00000262643 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
CCNE1-201ENST00000262643 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
CCNE1-201ENST00000262643 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
CCNE1-201ENST00000262643 KRTAP5-2Q701N4 177 aa6.18□□□□□ -1.42
CCNE1-201ENST00000262643 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
CCNE1-201ENST00000262643 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CCNE1-201ENST00000262643 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
CCNE1-201ENST00000262643 MT3P25713 68 aa5.87□□□□□ -1.47
CCNE1-201ENST00000262643 INE1O15225 51 aa5.84□□□□□ -1.48
CCNE1-201ENST00000262643 KRTAP5-8O75690 187 aa5.82□□□□□ -1.48
CCNE1-201ENST00000262643 KRTAP5-1Q6L8H4 278 aa5.53□□□□□ -1.52
CCNE1-201ENST00000262643 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
CCNE1-201ENST00000262643 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
CCNE1-201ENST00000262643 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
CCNE1-201ENST00000262643 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
CCNE1-201ENST00000262643 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
CCNE1-201ENST00000262643 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
CCNE1-201ENST00000262643 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
CCNE1-201ENST00000262643 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
CCNE1-201ENST00000262643 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
CCNE1-201ENST00000262643 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
CCNE1-201ENST00000262643 PRM1P04553 51 aa4.73□□□□□ -1.65
CCNE1-201ENST00000262643 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
CCNE1-201ENST00000262643 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
CCNE1-201ENST00000262643 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.69
CCNE1-201ENST00000262643 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
CCNE1-201ENST00000262643 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
CCNE1-201ENST00000262643 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
CCNE1-201ENST00000262643 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
CCNE1-201ENST00000262643 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
CCNE1-201ENST00000262643 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CCNE1-201ENST00000262643 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms