RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MT4P47944 62 aa4.39□□□□□ -1.71
TRAF4-202ENST00000262396 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
TRAF4-202ENST00000262396 A6NED7 52 aa4.38□□□□□ -1.71
TRAF4-202ENST00000262396 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
TRAF4-202ENST00000262396 TNP1P09430 55 aa4.36□□□□□ -1.71
TRAF4-202ENST00000262396 MT1MQ8N339 61 aa4.35□□□□□ -1.71
TRAF4-202ENST00000262396 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
TRAF4-202ENST00000262396 A8MU10 97 aa4.32□□□□□ -1.72
TRAF4-202ENST00000262396 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
TRAF4-202ENST00000262396 MT1LQ93083 61 aa4.32□□□□□ -1.72
TRAF4-202ENST00000262396 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
TRAF4-202ENST00000262396 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
TRAF4-202ENST00000262396 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
TRAF4-202ENST00000262396 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
TRAF4-202ENST00000262396 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
TRAF4-202ENST00000262396 K7ERS5 55 aa4.24□□□□□ -1.73
TRAF4-202ENST00000262396 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
TRAF4-202ENST00000262396 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
TRAF4-202ENST00000262396 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
TRAF4-202ENST00000262396 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
TRAF4-202ENST00000262396 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
TRAF4-202ENST00000262396 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
TRAF4-202ENST00000262396 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
TRAF4-202ENST00000262396 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
TRAF4-202ENST00000262396 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
TRAF4-202ENST00000262396 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
TRAF4-202ENST00000262396 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
TRAF4-202ENST00000262396 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
TRAF4-202ENST00000262396 H3BS24 57 aa3.98□□□□□ -1.77
TRAF4-202ENST00000262396 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
TRAF4-202ENST00000262396 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
TRAF4-202ENST00000262396 ROMO1P60602 79 aa3.96□□□□□ -1.78
TRAF4-202ENST00000262396 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
TRAF4-202ENST00000262396 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
TRAF4-202ENST00000262396 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
TRAF4-202ENST00000262396 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
TRAF4-202ENST00000262396 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
TRAF4-202ENST00000262396 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
TRAF4-202ENST00000262396 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
TRAF4-202ENST00000262396 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
TRAF4-202ENST00000262396 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
TRAF4-202ENST00000262396 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
TRAF4-202ENST00000262396 MT1AP04731 61 aa3.69□□□□□ -1.82
TRAF4-202ENST00000262396 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
TRAF4-202ENST00000262396 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
TRAF4-202ENST00000262396 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
TRAF4-202ENST00000262396 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
TRAF4-202ENST00000262396 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
TRAF4-202ENST00000262396 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
TRAF4-202ENST00000262396 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
TRAF4-202ENST00000262396 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
TRAF4-202ENST00000262396 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
TRAF4-202ENST00000262396 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
TRAF4-202ENST00000262396 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
TRAF4-202ENST00000262396 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
TRAF4-202ENST00000262396 MT3P25713 68 aa3.43□□□□□ -1.86
TRAF4-202ENST00000262396 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
TRAF4-202ENST00000262396 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
TRAF4-202ENST00000262396 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
TRAF4-202ENST00000262396 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
TRAF4-202ENST00000262396 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
TRAF4-202ENST00000262396 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
TRAF4-202ENST00000262396 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
TRAF4-202ENST00000262396 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
TRAF4-202ENST00000262396 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
TRAF4-202ENST00000262396 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
TRAF4-202ENST00000262396 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TRAF4-202ENST00000262396 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
TRAF4-202ENST00000262396 INE1O15225 51 aa2.55□□□□□ -2
TRAF4-202ENST00000262396 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
TRAF4-202ENST00000262396 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TRAF4-202ENST00000262396 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
TRAF4-202ENST00000262396 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
TRAF4-202ENST00000262396 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
TRAF4-202ENST00000262396 PRM1P04553 51 aa2.02□□□□□ -2.09
TRAF4-202ENST00000262396 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
TRAF4-202ENST00000262396 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms