RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
RORA-201ENST00000261523 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
RORA-201ENST00000261523 INE1O15225 51 aa2.91□□□□□ -1.94
RORA-201ENST00000261523 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
RORA-201ENST00000261523 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
RORA-201ENST00000261523 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
RORA-201ENST00000261523 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
RORA-201ENST00000261523 MT1BP07438 61 aa2.79□□□□□ -1.96
RORA-201ENST00000261523 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
RORA-201ENST00000261523 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
RORA-201ENST00000261523 MT1XP80297 61 aa2.76□□□□□ -1.97
RORA-201ENST00000261523 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
RORA-201ENST00000261523 NEBP20929 6669 aa2.71□□□□□ -1.98
RORA-201ENST00000261523 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
RORA-201ENST00000261523 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
RORA-201ENST00000261523 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
RORA-201ENST00000261523 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
RORA-201ENST00000261523 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
RORA-201ENST00000261523 KMT2DO14686 5537 aa2.63□□□□□ -1.99
RORA-201ENST00000261523 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
RORA-201ENST00000261523 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
RORA-201ENST00000261523 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
RORA-201ENST00000261523 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
RORA-201ENST00000261523 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
RORA-201ENST00000261523 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
RORA-201ENST00000261523 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
RORA-201ENST00000261523 SPRR2EP22531 72 aa2.55□□□□□ -2
RORA-201ENST00000261523 SPRR2BP35325 72 aa2.55□□□□□ -2
RORA-201ENST00000261523 SPRR2AP35326 72 aa2.55□□□□□ -2
RORA-201ENST00000261523 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
RORA-201ENST00000261523 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
RORA-201ENST00000261523 SPRR2DP22532 72 aa2.47□□□□□ -2.01
RORA-201ENST00000261523 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
RORA-201ENST00000261523 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
RORA-201ENST00000261523 MT3P25713 68 aa2.4□□□□□ -2.03
RORA-201ENST00000261523 MT1LQ93083 61 aa2.38□□□□□ -2.03
RORA-201ENST00000261523 MT1EP04732 61 aa2.38□□□□□ -2.03
RORA-201ENST00000261523 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
RORA-201ENST00000261523 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
RORA-201ENST00000261523 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
RORA-201ENST00000261523 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
RORA-201ENST00000261523 MT1GP13640 62 aa2.29□□□□□ -2.04
RORA-201ENST00000261523 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
RORA-201ENST00000261523 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
RORA-201ENST00000261523 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
RORA-201ENST00000261523 MT1MQ8N339 61 aa2.21□□□□□ -2.05
RORA-201ENST00000261523 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
RORA-201ENST00000261523 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
RORA-201ENST00000261523 MT4P47944 62 aa2.14□□□□□ -2.07
RORA-201ENST00000261523 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
RORA-201ENST00000261523 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
RORA-201ENST00000261523 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
RORA-201ENST00000261523 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
RORA-201ENST00000261523 MT1AP04731 61 aa2.03□□□□□ -2.08
RORA-201ENST00000261523 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
RORA-201ENST00000261523 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
RORA-201ENST00000261523 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
RORA-201ENST00000261523 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
RORA-201ENST00000261523 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
RORA-201ENST00000261523 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
RORA-201ENST00000261523 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
RORA-201ENST00000261523 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
RORA-201ENST00000261523 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
RORA-201ENST00000261523 PRM1P04553 51 aa1.89□□□□□ -2.11
RORA-201ENST00000261523 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
RORA-201ENST00000261523 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
RORA-201ENST00000261523 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
RORA-201ENST00000261523 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
RORA-201ENST00000261523 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
RORA-201ENST00000261523 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
RORA-201ENST00000261523 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
RORA-201ENST00000261523 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
RORA-201ENST00000261523 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
RORA-201ENST00000261523 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
RORA-201ENST00000261523 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
RORA-201ENST00000261523 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
RORA-201ENST00000261523 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms