RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
DDB2-201ENST00000256996 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
DDB2-201ENST00000256996 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
DDB2-201ENST00000256996 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
DDB2-201ENST00000256996 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
DDB2-201ENST00000256996 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
DDB2-201ENST00000256996 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
DDB2-201ENST00000256996 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
DDB2-201ENST00000256996 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
DDB2-201ENST00000256996 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
DDB2-201ENST00000256996 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
DDB2-201ENST00000256996 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
DDB2-201ENST00000256996 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
DDB2-201ENST00000256996 MT1EP04732 61 aa4.45□□□□□ -1.7
DDB2-201ENST00000256996 SPRR2EP22531 72 aa4.45□□□□□ -1.7
DDB2-201ENST00000256996 SPRR2BP35325 72 aa4.45□□□□□ -1.7
DDB2-201ENST00000256996 SPRR2AP35326 72 aa4.45□□□□□ -1.7
DDB2-201ENST00000256996 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
DDB2-201ENST00000256996 MT1LQ93083 61 aa4.35□□□□□ -1.71
DDB2-201ENST00000256996 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
DDB2-201ENST00000256996 SPRR2DP22532 72 aa4.31□□□□□ -1.72
DDB2-201ENST00000256996 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
DDB2-201ENST00000256996 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
DDB2-201ENST00000256996 MT1GP13640 62 aa4.25□□□□□ -1.73
DDB2-201ENST00000256996 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
DDB2-201ENST00000256996 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
DDB2-201ENST00000256996 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
DDB2-201ENST00000256996 MT1MQ8N339 61 aa4.19□□□□□ -1.74
DDB2-201ENST00000256996 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
DDB2-201ENST00000256996 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
DDB2-201ENST00000256996 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
DDB2-201ENST00000256996 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
DDB2-201ENST00000256996 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
DDB2-201ENST00000256996 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
DDB2-201ENST00000256996 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
DDB2-201ENST00000256996 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
DDB2-201ENST00000256996 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
DDB2-201ENST00000256996 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
DDB2-201ENST00000256996 MT4P47944 62 aa3.82□□□□□ -1.8
DDB2-201ENST00000256996 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
DDB2-201ENST00000256996 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
DDB2-201ENST00000256996 MT1AP04731 61 aa3.7□□□□□ -1.82
DDB2-201ENST00000256996 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
DDB2-201ENST00000256996 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
DDB2-201ENST00000256996 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
DDB2-201ENST00000256996 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
DDB2-201ENST00000256996 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
DDB2-201ENST00000256996 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
DDB2-201ENST00000256996 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
DDB2-201ENST00000256996 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
DDB2-201ENST00000256996 PRM1P04553 51 aa3.5□□□□□ -1.85
DDB2-201ENST00000256996 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
DDB2-201ENST00000256996 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
DDB2-201ENST00000256996 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
DDB2-201ENST00000256996 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
DDB2-201ENST00000256996 MT3P25713 68 aa3.35□□□□□ -1.87
DDB2-201ENST00000256996 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
DDB2-201ENST00000256996 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
DDB2-201ENST00000256996 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
DDB2-201ENST00000256996 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
DDB2-201ENST00000256996 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
DDB2-201ENST00000256996 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
DDB2-201ENST00000256996 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
DDB2-201ENST00000256996 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
DDB2-201ENST00000256996 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
DDB2-201ENST00000256996 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
DDB2-201ENST00000256996 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
DDB2-201ENST00000256996 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
DDB2-201ENST00000256996 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
DDB2-201ENST00000256996 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
DDB2-201ENST00000256996 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
DDB2-201ENST00000256996 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
DDB2-201ENST00000256996 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
DDB2-201ENST00000256996 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
DDB2-201ENST00000256996 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
DDB2-201ENST00000256996 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
DDB2-201ENST00000256996 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 71.6 ms