RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 KRTAP2-2Q9BYT5 123 aa6.66□□□□□ -1.34
SNRPA1-201ENST00000254193 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
SNRPA1-201ENST00000254193 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
SNRPA1-201ENST00000254193 TNP1P09430 55 aa6.61□□□□□ -1.35
SNRPA1-201ENST00000254193 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
SNRPA1-201ENST00000254193 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
SNRPA1-201ENST00000254193 PSPHP1O15172 72 aa6.56□□□□□ -1.36
SNRPA1-201ENST00000254193 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
SNRPA1-201ENST00000254193 V9GYY9 64 aa6.55□□□□□ -1.36
SNRPA1-201ENST00000254193 Q1T7F1 81 aa6.53□□□□□ -1.36
SNRPA1-201ENST00000254193 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
SNRPA1-201ENST00000254193 MT1GP13640 62 aa6.43□□□□□ -1.38
SNRPA1-201ENST00000254193 MT1LQ93083 61 aa6.41□□□□□ -1.38
SNRPA1-201ENST00000254193 K7ERS5 55 aa6.4□□□□□ -1.38
SNRPA1-201ENST00000254193 PCP4P48539 62 aa6.39□□□□□ -1.39
SNRPA1-201ENST00000254193 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
SNRPA1-201ENST00000254193 MT1MQ8N339 61 aa6.35□□□□□ -1.39
SNRPA1-201ENST00000254193 A6NED7 52 aa6.33□□□□□ -1.4
SNRPA1-201ENST00000254193 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-201ENST00000254193 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
SNRPA1-201ENST00000254193 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
SNRPA1-201ENST00000254193 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
SNRPA1-201ENST00000254193 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SNRPA1-201ENST00000254193 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
SNRPA1-201ENST00000254193 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
SNRPA1-201ENST00000254193 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
SNRPA1-201ENST00000254193 ROMO1P60602 79 aa6.02□□□□□ -1.45
SNRPA1-201ENST00000254193 MT4P47944 62 aa5.97□□□□□ -1.45
SNRPA1-201ENST00000254193 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
SNRPA1-201ENST00000254193 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
SNRPA1-201ENST00000254193 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
SNRPA1-201ENST00000254193 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SNRPA1-201ENST00000254193 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
SNRPA1-201ENST00000254193 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SNRPA1-201ENST00000254193 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
SNRPA1-201ENST00000254193 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
SNRPA1-201ENST00000254193 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
SNRPA1-201ENST00000254193 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
SNRPA1-201ENST00000254193 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
SNRPA1-201ENST00000254193 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
SNRPA1-201ENST00000254193 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
SNRPA1-201ENST00000254193 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
SNRPA1-201ENST00000254193 MT1AP04731 61 aa5.45□□□□□ -1.54
SNRPA1-201ENST00000254193 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
SNRPA1-201ENST00000254193 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
SNRPA1-201ENST00000254193 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
SNRPA1-201ENST00000254193 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
SNRPA1-201ENST00000254193 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
SNRPA1-201ENST00000254193 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
SNRPA1-201ENST00000254193 MT3P25713 68 aa4.97□□□□□ -1.61
SNRPA1-201ENST00000254193 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
SNRPA1-201ENST00000254193 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
SNRPA1-201ENST00000254193 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
SNRPA1-201ENST00000254193 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
SNRPA1-201ENST00000254193 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
SNRPA1-201ENST00000254193 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
SNRPA1-201ENST00000254193 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
SNRPA1-201ENST00000254193 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
SNRPA1-201ENST00000254193 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
SNRPA1-201ENST00000254193 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
SNRPA1-201ENST00000254193 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
SNRPA1-201ENST00000254193 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SNRPA1-201ENST00000254193 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SNRPA1-201ENST00000254193 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
SNRPA1-201ENST00000254193 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
SNRPA1-201ENST00000254193 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
SNRPA1-201ENST00000254193 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SNRPA1-201ENST00000254193 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SNRPA1-201ENST00000254193 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
SNRPA1-201ENST00000254193 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SNRPA1-201ENST00000254193 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
SNRPA1-201ENST00000254193 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SNRPA1-201ENST00000254193 PRM1P04553 51 aa3.1□□□□□ -1.91
SNRPA1-201ENST00000254193 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
SNRPA1-201ENST00000254193 INE1O15225 51 aa2.79□□□□□ -1.96
SNRPA1-201ENST00000254193 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SNRPA1-201ENST00000254193 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 63.5 ms