RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 KRTAP19-7Q3SYF9 63 aa7.9□□□□□ -1.14
NEDD8-201ENST00000250495 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
NEDD8-201ENST00000250495 PRAC1Q96KF2 57 aa7.9□□□□□ -1.14
NEDD8-201ENST00000250495 MT1EP04732 61 aa7.85□□□□□ -1.15
NEDD8-201ENST00000250495 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
NEDD8-201ENST00000250495 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
NEDD8-201ENST00000250495 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
NEDD8-201ENST00000250495 KRTAP4-9Q9BYQ8 210 aa7.74□□□□□ -1.17
NEDD8-201ENST00000250495 MT1GP13640 62 aa7.67□□□□□ -1.18
NEDD8-201ENST00000250495 KRTAP19-5Q3LI72 72 aa7.65□□□□□ -1.18
NEDD8-201ENST00000250495 GPR98Q8WXG9 6306 aa7.64□□□□□ -1.19
NEDD8-201ENST00000250495 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
NEDD8-201ENST00000250495 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
NEDD8-201ENST00000250495 LCE1DQ5T752 114 aa7.53□□□□□ -1.2
NEDD8-201ENST00000250495 LCE4AQ5TA78 99 aa7.5□□□□□ -1.21
NEDD8-201ENST00000250495 MT1MQ8N339 61 aa7.49□□□□□ -1.21
NEDD8-201ENST00000250495 MT1LQ93083 61 aa7.46□□□□□ -1.22
NEDD8-201ENST00000250495 MT4P47944 62 aa7.42□□□□□ -1.22
NEDD8-201ENST00000250495 TNP1P09430 55 aa7.39□□□□□ -1.23
NEDD8-201ENST00000250495 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
NEDD8-201ENST00000250495 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
NEDD8-201ENST00000250495 HMCN1Q96RW7 5635 aa7.33□□□□□ -1.24
NEDD8-201ENST00000250495 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
NEDD8-201ENST00000250495 KRTAP5-4Q6L8H1 288 aa7.29□□□□□ -1.24
NEDD8-201ENST00000250495 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
NEDD8-201ENST00000250495 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
NEDD8-201ENST00000250495 KRTAP5-10Q6L8G5 202 aa7.11□□□□□ -1.27
NEDD8-201ENST00000250495 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
NEDD8-201ENST00000250495 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
NEDD8-201ENST00000250495 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
NEDD8-201ENST00000250495 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
NEDD8-201ENST00000250495 KRTAP20-2Q3LI61 65 aa6.89□□□□□ -1.31
NEDD8-201ENST00000250495 KRTAP5-7Q6L8G8 165 aa6.88□□□□□ -1.31
NEDD8-201ENST00000250495 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-201ENST00000250495 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
NEDD8-201ENST00000250495 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
NEDD8-201ENST00000250495 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
NEDD8-201ENST00000250495 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
NEDD8-201ENST00000250495 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.34
NEDD8-201ENST00000250495 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
NEDD8-201ENST00000250495 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
NEDD8-201ENST00000250495 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
NEDD8-201ENST00000250495 MT1AP04731 61 aa6.36□□□□□ -1.39
NEDD8-201ENST00000250495 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
NEDD8-201ENST00000250495 KRTAP5-2Q701N4 177 aa6.33□□□□□ -1.4
NEDD8-201ENST00000250495 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
NEDD8-201ENST00000250495 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
NEDD8-201ENST00000250495 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
NEDD8-201ENST00000250495 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
NEDD8-201ENST00000250495 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
NEDD8-201ENST00000250495 H3BS24 57 aa6.02□□□□□ -1.45
NEDD8-201ENST00000250495 MUC5BQ9HC84 5762 aaPredicted RBP5.92□□□□□ -1.46
NEDD8-201ENST00000250495 AHNAKQ09666 5890 aaKnown RBP5.92□□□□□ -1.46
NEDD8-201ENST00000250495 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
NEDD8-201ENST00000250495 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
NEDD8-201ENST00000250495 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
NEDD8-201ENST00000250495 MT3P25713 68 aa5.86□□□□□ -1.47
NEDD8-201ENST00000250495 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
NEDD8-201ENST00000250495 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
NEDD8-201ENST00000250495 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
NEDD8-201ENST00000250495 INE1O15225 51 aa5.42□□□□□ -1.54
NEDD8-201ENST00000250495 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
NEDD8-201ENST00000250495 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
NEDD8-201ENST00000250495 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
NEDD8-201ENST00000250495 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
NEDD8-201ENST00000250495 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
NEDD8-201ENST00000250495 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
NEDD8-201ENST00000250495 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
NEDD8-201ENST00000250495 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
NEDD8-201ENST00000250495 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
NEDD8-201ENST00000250495 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
NEDD8-201ENST00000250495 PHGR1C9JFL3 82 aa4.16□□□□□ -1.74
NEDD8-201ENST00000250495 PRM1P04553 51 aa4.14□□□□□ -1.75
NEDD8-201ENST00000250495 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
NEDD8-201ENST00000250495 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
NEDD8-201ENST00000250495 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
NEDD8-201ENST00000250495 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 14.9 ms