RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 A0A0D9SG42 100 aa5.08□□□□□ -1.6
APOBEC3A-201ENST00000249116 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
APOBEC3A-201ENST00000249116 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
APOBEC3A-201ENST00000249116 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
APOBEC3A-201ENST00000249116 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
APOBEC3A-201ENST00000249116 Q1T7F1 81 aa5.01□□□□□ -1.61
APOBEC3A-201ENST00000249116 BRK1Q8WUW1 75 aa5□□□□□ -1.61
APOBEC3A-201ENST00000249116 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
APOBEC3A-201ENST00000249116 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
APOBEC3A-201ENST00000249116 A8MU10 97 aa4.97□□□□□ -1.61
APOBEC3A-201ENST00000249116 UQCR11O14957 56 aa4.9□□□□□ -1.62
APOBEC3A-201ENST00000249116 PSPHP1O15172 72 aa4.85□□□□□ -1.63
APOBEC3A-201ENST00000249116 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.63
APOBEC3A-201ENST00000249116 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
APOBEC3A-201ENST00000249116 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
APOBEC3A-201ENST00000249116 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
APOBEC3A-201ENST00000249116 MT1EP04732 61 aa4.81□□□□□ -1.64
APOBEC3A-201ENST00000249116 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
APOBEC3A-201ENST00000249116 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
APOBEC3A-201ENST00000249116 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
APOBEC3A-201ENST00000249116 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
APOBEC3A-201ENST00000249116 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
APOBEC3A-201ENST00000249116 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.65
APOBEC3A-201ENST00000249116 MT1GP13640 62 aa4.71□□□□□ -1.66
APOBEC3A-201ENST00000249116 A6NED7 52 aa4.7□□□□□ -1.66
APOBEC3A-201ENST00000249116 TNP1P09430 55 aa4.69□□□□□ -1.66
APOBEC3A-201ENST00000249116 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
APOBEC3A-201ENST00000249116 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
APOBEC3A-201ENST00000249116 K7ERS5 55 aa4.67□□□□□ -1.66
APOBEC3A-201ENST00000249116 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
APOBEC3A-201ENST00000249116 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
APOBEC3A-201ENST00000249116 MT1MQ8N339 61 aa4.6□□□□□ -1.67
APOBEC3A-201ENST00000249116 MT4P47944 62 aa4.59□□□□□ -1.67
APOBEC3A-201ENST00000249116 MT1LQ93083 61 aa4.56□□□□□ -1.68
APOBEC3A-201ENST00000249116 MT3P25713 68 aa4.55□□□□□ -1.68
APOBEC3A-201ENST00000249116 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
APOBEC3A-201ENST00000249116 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
APOBEC3A-201ENST00000249116 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
APOBEC3A-201ENST00000249116 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
APOBEC3A-201ENST00000249116 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
APOBEC3A-201ENST00000249116 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
APOBEC3A-201ENST00000249116 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
APOBEC3A-201ENST00000249116 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
APOBEC3A-201ENST00000249116 ROMO1P60602 79 aa4.4□□□□□ -1.7
APOBEC3A-201ENST00000249116 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
APOBEC3A-201ENST00000249116 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
APOBEC3A-201ENST00000249116 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
APOBEC3A-201ENST00000249116 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
APOBEC3A-201ENST00000249116 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.73
APOBEC3A-201ENST00000249116 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
APOBEC3A-201ENST00000249116 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
APOBEC3A-201ENST00000249116 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
APOBEC3A-201ENST00000249116 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
APOBEC3A-201ENST00000249116 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
APOBEC3A-201ENST00000249116 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
APOBEC3A-201ENST00000249116 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
APOBEC3A-201ENST00000249116 MT1AP04731 61 aa3.9□□□□□ -1.78
APOBEC3A-201ENST00000249116 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
APOBEC3A-201ENST00000249116 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
APOBEC3A-201ENST00000249116 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
APOBEC3A-201ENST00000249116 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
APOBEC3A-201ENST00000249116 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
APOBEC3A-201ENST00000249116 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
APOBEC3A-201ENST00000249116 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
APOBEC3A-201ENST00000249116 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
APOBEC3A-201ENST00000249116 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
APOBEC3A-201ENST00000249116 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
APOBEC3A-201ENST00000249116 INE1O15225 51 aa3.32□□□□□ -1.88
APOBEC3A-201ENST00000249116 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
APOBEC3A-201ENST00000249116 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
APOBEC3A-201ENST00000249116 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
APOBEC3A-201ENST00000249116 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
APOBEC3A-201ENST00000249116 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
APOBEC3A-201ENST00000249116 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
APOBEC3A-201ENST00000249116 PRM1P04553 51 aa2.27□□□□□ -2.05
APOBEC3A-201ENST00000249116 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
APOBEC3A-201ENST00000249116 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms