RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
DDX39A-201ENST00000242776 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
DDX39A-201ENST00000242776 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
DDX39A-201ENST00000242776 MT4P47944 62 aa5.21□□□□□ -1.58
DDX39A-201ENST00000242776 TNP1P09430 55 aa5.2□□□□□ -1.58
DDX39A-201ENST00000242776 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
DDX39A-201ENST00000242776 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
DDX39A-201ENST00000242776 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
DDX39A-201ENST00000242776 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
DDX39A-201ENST00000242776 MT1EP04732 61 aa5.14□□□□□ -1.59
DDX39A-201ENST00000242776 ROMO1P60602 79 aa5.13□□□□□ -1.59
DDX39A-201ENST00000242776 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
DDX39A-201ENST00000242776 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
DDX39A-201ENST00000242776 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
DDX39A-201ENST00000242776 PMAIP1Q13794 54 aa5□□□□□ -1.61
DDX39A-201ENST00000242776 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
DDX39A-201ENST00000242776 MT1GP13640 62 aa4.98□□□□□ -1.61
DDX39A-201ENST00000242776 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
DDX39A-201ENST00000242776 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
DDX39A-201ENST00000242776 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
DDX39A-201ENST00000242776 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
DDX39A-201ENST00000242776 MT1MQ8N339 61 aa4.94□□□□□ -1.62
DDX39A-201ENST00000242776 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
DDX39A-201ENST00000242776 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.62
DDX39A-201ENST00000242776 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
DDX39A-201ENST00000242776 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
DDX39A-201ENST00000242776 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
DDX39A-201ENST00000242776 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
DDX39A-201ENST00000242776 MT1LQ93083 61 aa4.84□□□□□ -1.63
DDX39A-201ENST00000242776 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
DDX39A-201ENST00000242776 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
DDX39A-201ENST00000242776 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
DDX39A-201ENST00000242776 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
DDX39A-201ENST00000242776 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
DDX39A-201ENST00000242776 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
DDX39A-201ENST00000242776 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
DDX39A-201ENST00000242776 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
DDX39A-201ENST00000242776 H3BS24 57 aa4.49□□□□□ -1.69
DDX39A-201ENST00000242776 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
DDX39A-201ENST00000242776 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
DDX39A-201ENST00000242776 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
DDX39A-201ENST00000242776 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
DDX39A-201ENST00000242776 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
DDX39A-201ENST00000242776 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
DDX39A-201ENST00000242776 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
DDX39A-201ENST00000242776 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
DDX39A-201ENST00000242776 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
DDX39A-201ENST00000242776 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
DDX39A-201ENST00000242776 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
DDX39A-201ENST00000242776 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
DDX39A-201ENST00000242776 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
DDX39A-201ENST00000242776 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
DDX39A-201ENST00000242776 MT1AP04731 61 aa4.1□□□□□ -1.75
DDX39A-201ENST00000242776 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
DDX39A-201ENST00000242776 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
DDX39A-201ENST00000242776 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
DDX39A-201ENST00000242776 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
DDX39A-201ENST00000242776 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
DDX39A-201ENST00000242776 MT3P25713 68 aa3.76□□□□□ -1.81
DDX39A-201ENST00000242776 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
DDX39A-201ENST00000242776 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
DDX39A-201ENST00000242776 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
DDX39A-201ENST00000242776 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
DDX39A-201ENST00000242776 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
DDX39A-201ENST00000242776 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
DDX39A-201ENST00000242776 INE1O15225 51 aa3.23□□□□□ -1.89
DDX39A-201ENST00000242776 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
DDX39A-201ENST00000242776 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
DDX39A-201ENST00000242776 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
DDX39A-201ENST00000242776 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
DDX39A-201ENST00000242776 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
DDX39A-201ENST00000242776 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
DDX39A-201ENST00000242776 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
DDX39A-201ENST00000242776 PRM1P04553 51 aa2.64□□□□□ -1.99
DDX39A-201ENST00000242776 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
DDX39A-201ENST00000242776 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
DDX39A-201ENST00000242776 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 87.9 ms