RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
GPN3-201ENST00000228827 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
GPN3-201ENST00000228827 PSPHP1O15172 72 aa5.39□□□□□ -1.55
GPN3-201ENST00000228827 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
GPN3-201ENST00000228827 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
GPN3-201ENST00000228827 MT1EP04732 61 aa5.3□□□□□ -1.56
GPN3-201ENST00000228827 UQCR11O14957 56 aa5.28□□□□□ -1.56
GPN3-201ENST00000228827 A8MU10 97 aa5.26□□□□□ -1.57
GPN3-201ENST00000228827 A6NED7 52 aa5.26□□□□□ -1.57
GPN3-201ENST00000228827 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
GPN3-201ENST00000228827 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
GPN3-201ENST00000228827 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
GPN3-201ENST00000228827 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
GPN3-201ENST00000228827 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
GPN3-201ENST00000228827 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
GPN3-201ENST00000228827 MT1GP13640 62 aa5.12□□□□□ -1.59
GPN3-201ENST00000228827 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
GPN3-201ENST00000228827 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
GPN3-201ENST00000228827 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
GPN3-201ENST00000228827 TNP1P09430 55 aa5.08□□□□□ -1.6
GPN3-201ENST00000228827 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
GPN3-201ENST00000228827 MT1LQ93083 61 aa5.07□□□□□ -1.6
GPN3-201ENST00000228827 K7ERS5 55 aa5.06□□□□□ -1.6
GPN3-201ENST00000228827 MT1MQ8N339 61 aa5.05□□□□□ -1.6
GPN3-201ENST00000228827 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
GPN3-201ENST00000228827 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
GPN3-201ENST00000228827 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
GPN3-201ENST00000228827 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
GPN3-201ENST00000228827 MT4P47944 62 aa4.91□□□□□ -1.62
GPN3-201ENST00000228827 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
GPN3-201ENST00000228827 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
GPN3-201ENST00000228827 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
GPN3-201ENST00000228827 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
GPN3-201ENST00000228827 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
GPN3-201ENST00000228827 ROMO1P60602 79 aa4.76□□□□□ -1.65
GPN3-201ENST00000228827 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
GPN3-201ENST00000228827 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
GPN3-201ENST00000228827 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
GPN3-201ENST00000228827 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
GPN3-201ENST00000228827 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
GPN3-201ENST00000228827 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
GPN3-201ENST00000228827 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
GPN3-201ENST00000228827 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
GPN3-201ENST00000228827 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
GPN3-201ENST00000228827 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
GPN3-201ENST00000228827 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
GPN3-201ENST00000228827 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
GPN3-201ENST00000228827 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
GPN3-201ENST00000228827 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
GPN3-201ENST00000228827 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
GPN3-201ENST00000228827 MT1AP04731 61 aa4.3□□□□□ -1.72
GPN3-201ENST00000228827 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
GPN3-201ENST00000228827 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
GPN3-201ENST00000228827 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
GPN3-201ENST00000228827 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
GPN3-201ENST00000228827 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
GPN3-201ENST00000228827 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
GPN3-201ENST00000228827 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
GPN3-201ENST00000228827 MT3P25713 68 aa3.93□□□□□ -1.78
GPN3-201ENST00000228827 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
GPN3-201ENST00000228827 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
GPN3-201ENST00000228827 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
GPN3-201ENST00000228827 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
GPN3-201ENST00000228827 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
GPN3-201ENST00000228827 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
GPN3-201ENST00000228827 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
GPN3-201ENST00000228827 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
GPN3-201ENST00000228827 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
GPN3-201ENST00000228827 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
GPN3-201ENST00000228827 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
GPN3-201ENST00000228827 INE1O15225 51 aa2.96□□□□□ -1.94
GPN3-201ENST00000228827 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
GPN3-201ENST00000228827 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
GPN3-201ENST00000228827 PRM1P04553 51 aa2.45□□□□□ -2.02
GPN3-201ENST00000228827 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
GPN3-201ENST00000228827 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
GPN3-201ENST00000228827 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 76.1 ms