RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
SUPT4H1-201ENST00000225504 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
SUPT4H1-201ENST00000225504 UQCR11O14957 56 aa5.62□□□□□ -1.51
SUPT4H1-201ENST00000225504 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
SUPT4H1-201ENST00000225504 NEBP20929 6669 aa5.62□□□□□ -1.51
SUPT4H1-201ENST00000225504 K7ERS5 55 aa5.61□□□□□ -1.51
SUPT4H1-201ENST00000225504 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
SUPT4H1-201ENST00000225504 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
SUPT4H1-201ENST00000225504 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
SUPT4H1-201ENST00000225504 SPRR2EP22531 72 aa5.5□□□□□ -1.53
SUPT4H1-201ENST00000225504 SPRR2BP35325 72 aa5.5□□□□□ -1.53
SUPT4H1-201ENST00000225504 SPRR2AP35326 72 aa5.5□□□□□ -1.53
SUPT4H1-201ENST00000225504 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
SUPT4H1-201ENST00000225504 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.53
SUPT4H1-201ENST00000225504 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SUPT4H1-201ENST00000225504 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
SUPT4H1-201ENST00000225504 TNP1P09430 55 aa5.39□□□□□ -1.55
SUPT4H1-201ENST00000225504 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
SUPT4H1-201ENST00000225504 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
SUPT4H1-201ENST00000225504 MT1EP04732 61 aa5.33□□□□□ -1.56
SUPT4H1-201ENST00000225504 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SUPT4H1-201ENST00000225504 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
SUPT4H1-201ENST00000225504 SPRR2DP22532 72 aa5.3□□□□□ -1.56
SUPT4H1-201ENST00000225504 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
SUPT4H1-201ENST00000225504 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
SUPT4H1-201ENST00000225504 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
SUPT4H1-201ENST00000225504 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
SUPT4H1-201ENST00000225504 MT1LQ93083 61 aa5.14□□□□□ -1.59
SUPT4H1-201ENST00000225504 MT1GP13640 62 aa5.13□□□□□ -1.59
SUPT4H1-201ENST00000225504 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
SUPT4H1-201ENST00000225504 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
SUPT4H1-201ENST00000225504 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
SUPT4H1-201ENST00000225504 MT1MQ8N339 61 aa5.07□□□□□ -1.6
SUPT4H1-201ENST00000225504 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
SUPT4H1-201ENST00000225504 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SUPT4H1-201ENST00000225504 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
SUPT4H1-201ENST00000225504 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SUPT4H1-201ENST00000225504 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
SUPT4H1-201ENST00000225504 MT4P47944 62 aa4.64□□□□□ -1.67
SUPT4H1-201ENST00000225504 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SUPT4H1-201ENST00000225504 INE1O15225 51 aa4.59□□□□□ -1.67
SUPT4H1-201ENST00000225504 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
SUPT4H1-201ENST00000225504 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
SUPT4H1-201ENST00000225504 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
SUPT4H1-201ENST00000225504 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
SUPT4H1-201ENST00000225504 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SUPT4H1-201ENST00000225504 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
SUPT4H1-201ENST00000225504 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
SUPT4H1-201ENST00000225504 MT1AP04731 61 aa4.37□□□□□ -1.71
SUPT4H1-201ENST00000225504 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SUPT4H1-201ENST00000225504 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
SUPT4H1-201ENST00000225504 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
SUPT4H1-201ENST00000225504 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
SUPT4H1-201ENST00000225504 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
SUPT4H1-201ENST00000225504 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
SUPT4H1-201ENST00000225504 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SUPT4H1-201ENST00000225504 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SUPT4H1-201ENST00000225504 MT3P25713 68 aa3.97□□□□□ -1.77
SUPT4H1-201ENST00000225504 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
SUPT4H1-201ENST00000225504 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SUPT4H1-201ENST00000225504 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
SUPT4H1-201ENST00000225504 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SUPT4H1-201ENST00000225504 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
SUPT4H1-201ENST00000225504 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SUPT4H1-201ENST00000225504 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
SUPT4H1-201ENST00000225504 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
SUPT4H1-201ENST00000225504 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
SUPT4H1-201ENST00000225504 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
SUPT4H1-201ENST00000225504 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
SUPT4H1-201ENST00000225504 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SUPT4H1-201ENST00000225504 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SUPT4H1-201ENST00000225504 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SUPT4H1-201ENST00000225504 PRM1P04553 51 aa2.63□□□□□ -1.99
SUPT4H1-201ENST00000225504 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SUPT4H1-201ENST00000225504 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SUPT4H1-201ENST00000225504 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SUPT4H1-201ENST00000225504 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 62.4 ms