RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
CHMP5-201ENST00000223500 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
CHMP5-201ENST00000223500 MT1EP04732 61 aa6.08□□□□□ -1.44
CHMP5-201ENST00000223500 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
CHMP5-201ENST00000223500 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
CHMP5-201ENST00000223500 SPRR2EP22531 72 aa5.95□□□□□ -1.46
CHMP5-201ENST00000223500 SPRR2BP35325 72 aa5.95□□□□□ -1.46
CHMP5-201ENST00000223500 SPRR2AP35326 72 aa5.95□□□□□ -1.46
CHMP5-201ENST00000223500 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
CHMP5-201ENST00000223500 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
CHMP5-201ENST00000223500 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
CHMP5-201ENST00000223500 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
CHMP5-201ENST00000223500 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
CHMP5-201ENST00000223500 MT1LQ93083 61 aa5.91□□□□□ -1.46
CHMP5-201ENST00000223500 NEBP20929 6669 aa5.88□□□□□ -1.47
CHMP5-201ENST00000223500 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
CHMP5-201ENST00000223500 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
CHMP5-201ENST00000223500 MT1GP13640 62 aa5.85□□□□□ -1.47
CHMP5-201ENST00000223500 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
CHMP5-201ENST00000223500 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
CHMP5-201ENST00000223500 SPRR2DP22532 72 aa5.74□□□□□ -1.49
CHMP5-201ENST00000223500 MT1MQ8N339 61 aa5.74□□□□□ -1.49
CHMP5-201ENST00000223500 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
CHMP5-201ENST00000223500 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
CHMP5-201ENST00000223500 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
CHMP5-201ENST00000223500 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
CHMP5-201ENST00000223500 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
CHMP5-201ENST00000223500 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
CHMP5-201ENST00000223500 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
CHMP5-201ENST00000223500 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
CHMP5-201ENST00000223500 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.53
CHMP5-201ENST00000223500 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
CHMP5-201ENST00000223500 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
CHMP5-201ENST00000223500 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
CHMP5-201ENST00000223500 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
CHMP5-201ENST00000223500 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
CHMP5-201ENST00000223500 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
CHMP5-201ENST00000223500 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
CHMP5-201ENST00000223500 H3BS24 57 aa5.05□□□□□ -1.6
CHMP5-201ENST00000223500 MT1AP04731 61 aa5.05□□□□□ -1.6
CHMP5-201ENST00000223500 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
CHMP5-201ENST00000223500 MT4P47944 62 aa4.97□□□□□ -1.61
CHMP5-201ENST00000223500 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
CHMP5-201ENST00000223500 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
CHMP5-201ENST00000223500 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
CHMP5-201ENST00000223500 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
CHMP5-201ENST00000223500 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
CHMP5-201ENST00000223500 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
CHMP5-201ENST00000223500 MT3P25713 68 aa4.61□□□□□ -1.67
CHMP5-201ENST00000223500 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
CHMP5-201ENST00000223500 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
CHMP5-201ENST00000223500 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
CHMP5-201ENST00000223500 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
CHMP5-201ENST00000223500 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
CHMP5-201ENST00000223500 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
CHMP5-201ENST00000223500 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
CHMP5-201ENST00000223500 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CHMP5-201ENST00000223500 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
CHMP5-201ENST00000223500 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
CHMP5-201ENST00000223500 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CHMP5-201ENST00000223500 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
CHMP5-201ENST00000223500 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
CHMP5-201ENST00000223500 INE1O15225 51 aa3.94□□□□□ -1.78
CHMP5-201ENST00000223500 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
CHMP5-201ENST00000223500 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CHMP5-201ENST00000223500 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
CHMP5-201ENST00000223500 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
CHMP5-201ENST00000223500 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
CHMP5-201ENST00000223500 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
CHMP5-201ENST00000223500 PRM1P04553 51 aa3.42□□□□□ -1.86
CHMP5-201ENST00000223500 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CHMP5-201ENST00000223500 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
CHMP5-201ENST00000223500 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CHMP5-201ENST00000223500 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
CHMP5-201ENST00000223500 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CHMP5-201ENST00000223500 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CHMP5-201ENST00000223500 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms