RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
RPA3-201ENST00000223129 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
RPA3-201ENST00000223129 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
RPA3-201ENST00000223129 TNP1P09430 55 aa5.76□□□□□ -1.49
RPA3-201ENST00000223129 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
RPA3-201ENST00000223129 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
RPA3-201ENST00000223129 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
RPA3-201ENST00000223129 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
RPA3-201ENST00000223129 NEBP20929 6669 aa5.64□□□□□ -1.51
RPA3-201ENST00000223129 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
RPA3-201ENST00000223129 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
RPA3-201ENST00000223129 SPRR2EP22531 72 aa5.6□□□□□ -1.51
RPA3-201ENST00000223129 SPRR2BP35325 72 aa5.6□□□□□ -1.51
RPA3-201ENST00000223129 SPRR2AP35326 72 aa5.6□□□□□ -1.51
RPA3-201ENST00000223129 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
RPA3-201ENST00000223129 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
RPA3-201ENST00000223129 MT1EP04732 61 aa5.54□□□□□ -1.52
RPA3-201ENST00000223129 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
RPA3-201ENST00000223129 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
RPA3-201ENST00000223129 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
RPA3-201ENST00000223129 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
RPA3-201ENST00000223129 SPRR2DP22532 72 aa5.4□□□□□ -1.55
RPA3-201ENST00000223129 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
RPA3-201ENST00000223129 MT1LQ93083 61 aa5.36□□□□□ -1.55
RPA3-201ENST00000223129 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
RPA3-201ENST00000223129 MT1GP13640 62 aa5.32□□□□□ -1.56
RPA3-201ENST00000223129 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
RPA3-201ENST00000223129 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
RPA3-201ENST00000223129 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
RPA3-201ENST00000223129 MT1MQ8N339 61 aa5.24□□□□□ -1.57
RPA3-201ENST00000223129 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
RPA3-201ENST00000223129 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
RPA3-201ENST00000223129 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
RPA3-201ENST00000223129 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
RPA3-201ENST00000223129 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
RPA3-201ENST00000223129 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
RPA3-201ENST00000223129 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
RPA3-201ENST00000223129 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
RPA3-201ENST00000223129 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
RPA3-201ENST00000223129 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
RPA3-201ENST00000223129 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
RPA3-201ENST00000223129 INE1O15225 51 aa4.73□□□□□ -1.65
RPA3-201ENST00000223129 MT4P47944 62 aa4.72□□□□□ -1.65
RPA3-201ENST00000223129 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
RPA3-201ENST00000223129 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
RPA3-201ENST00000223129 MT1AP04731 61 aa4.55□□□□□ -1.68
RPA3-201ENST00000223129 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
RPA3-201ENST00000223129 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
RPA3-201ENST00000223129 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
RPA3-201ENST00000223129 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
RPA3-201ENST00000223129 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
RPA3-201ENST00000223129 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
RPA3-201ENST00000223129 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
RPA3-201ENST00000223129 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
RPA3-201ENST00000223129 MT3P25713 68 aa4.14□□□□□ -1.75
RPA3-201ENST00000223129 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
RPA3-201ENST00000223129 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
RPA3-201ENST00000223129 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
RPA3-201ENST00000223129 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
RPA3-201ENST00000223129 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
RPA3-201ENST00000223129 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
RPA3-201ENST00000223129 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
RPA3-201ENST00000223129 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
RPA3-201ENST00000223129 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
RPA3-201ENST00000223129 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
RPA3-201ENST00000223129 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
RPA3-201ENST00000223129 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
RPA3-201ENST00000223129 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
RPA3-201ENST00000223129 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
RPA3-201ENST00000223129 PRM1P04553 51 aa3.39□□□□□ -1.87
RPA3-201ENST00000223129 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
RPA3-201ENST00000223129 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
RPA3-201ENST00000223129 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
RPA3-201ENST00000223129 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
RPA3-201ENST00000223129 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
RPA3-201ENST00000223129 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RPA3-201ENST00000223129 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 169.7 ms